Search result

BaseInfo

ncRNA ID novel_gma_miR4019
Species Glycine max
Class miRNA
Genome position Chr9:16653122-16653163 [+]
Reference genome Glycine_max_v2.0
Source SRR1451681
Length 19
Mature sequence(if miRNA) 1 - CCGCGUCGCCCUCCUGCCG - 19
Stem-loop(if miRNA) -   - -     CCU      G
 CCG C GUCGC   CCUGCC A
 ||| | |||||   ||||||
 GGU G CAGCG   GGAUGG A
C   U A     -UU      G
Stem-loop sequence CCGCGUCGCCCUCCUGCCGAAGGGUAGGUUGCGACAGUUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604953.2
ncRNA:19   GCCGUCCUCCCGCUGCGCC   1
  ||||=|||||||||||||*
targets:544   CGGCGGGAGGGCGACGCGA   562

2.0 PREDICTED: Glycine max putative exosome complex component rrp40 (LOC100778661), mRNA putative exosome complex component rrp40(LOC100778661) coding protein psRNATarget
XM_006606762.2
ncRNA:19   GCCGUCCUCCCGCUGCGCC   1
  ||||=||||||=|||||||
targets:348   CGGCGGGAGGGUGACGCGG   366

2.5 PREDICTED: Glycine max uncharacterized LOC100807920 (LOC100807920), mRNA uncharacterized LOC100807920(LOC100807920) coding protein psRNATarget