ncRNA ID | novel_gma_miR4008 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:15588800-15588900 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451680;SRR1451681 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUUUGGAUGCGAAAAAAGGA - 20 |
Stem-loop(if miRNA) |
--         G  -A     GAAA    AUUUAUUC     UU     AGU   UUUUUUUUG AU  AAAUU    AACA        UUUUC  UUGAU   U   ||||||||| ||  |||||    ||||        |||||  |||||   GAAAAAAGC UA  UUUAA    UUGU        AAAAG  AACUA   U AG         G  GG     -AAA    AUUUAAAA     -U     AAC |
Stem-loop sequence | UUUUUUUUGGAUAAAAUUGAAAAACAAUUUAUUCUUUUCUUUUGAUAGUUUCAAAUCAAUGAAAAAAAAUUUAUGUUAAAAAUUUGGAUGCGAAAAAAGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003556600.3 |
|
2.5 | PREDICTED: Glycine max proline-rich antigen homolog (LOC100820386), mRNA | proline-rich antigen homolog(LOC100820386) | coding protein | psRNATarget |