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BaseInfo

ncRNA ID	novel_gma_miR4006
Species	Glycine max
Class	miRNA
Genome position	Chr8:13400096-13400211 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451680
Length	19
Mature sequence(if miRNA)	98 - CUCUGCACAGUUCAAUCCA - 116
Stem-loop(if miRNA)	--C    -        A   CAAAGUAC      AUAGAUUCGAUCCAUUGCAUAAUCUG    UCUG CACAGUUC AUC        AGAUAG                          A    |||| |||||||| |||        ||||||    AGGC GUGUUAAG UAG        AAAAAA                          A GCA    A        C   ---CAUUA      AAAAUUUUUUCUCCUUUAUUUUUCCG
Stem-loop sequence	CUCUGCACAGUUCAAUCCAAAGUACAGAUAGAUAGAUUCGAUCCAUUGCAUAAUCUGAAGCCUUUUUAUUUCCUCUUUUUUAAAAAAAAAAAUUACGAUCGAAUUGUGACGGAACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006585170.2	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1606   UGGCUUCAACUGUGCAGAG   1624 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100814590), transcript variant X4, mRNA	lysine-specific demethylase JMJ18-like(LOC100814590)	coding protein	psRNATarget
XM_014768227.1	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1569   UGGCUUCAACUGUGCAGAG   1587 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100801775), transcript variant X3, mRNA	lysine-specific demethylase JMJ18-like(LOC100801775)	coding protein	psRNATarget
XM_006585167.2	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1654   UGGCUUCAACUGUGCAGAG   1672 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100814590), transcript variant X2, mRNA	lysine-specific demethylase JMJ18-like(LOC100814590)	coding protein	psRNATarget
XM_003534957.3	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1731   UGGCUUCAACUGUGCAGAG   1749 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100781830), mRNA	lysine-specific demethylase JMJ18-like(LOC100781830)	coding protein	psRNATarget
XM_006585168.2	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1744   UGGCUUCAACUGUGCAGAG   1762 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100814590), transcript variant X3, mRNA	lysine-specific demethylase JMJ18-like(LOC100814590)	coding protein	psRNATarget
XM_003547514.3	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1726   UGGCUUCAACUGUGCAGAG   1744 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100801775), transcript variant X1, mRNA	lysine-specific demethylase JMJ18-like(LOC100801775)	coding protein	psRNATarget
XM_006597856.2	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1727   UGGCUUCAACUGUGCAGAG   1745 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100801775), transcript variant X2, mRNA	lysine-specific demethylase JMJ18-like(LOC100801775)	coding protein	psRNATarget
XM_006585166.2	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1792   UGGCUUCAACUGUGCAGAG   1810 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100814590), transcript variant X1, mRNA	lysine-specific demethylase JMJ18-like(LOC100814590)	coding protein	psRNATarget
XM_006580171.2	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:1910   UGGCUUCAACUGUGCAGAG   1928 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100784581), transcript variant X1, mRNA	lysine-specific demethylase JMJ18-like(LOC100784581)	coding protein	psRNATarget
XM_006580172.2	ncRNA:19   ACCUAACUUGACACGUCUC   1   |||*||*|||||||||||| targets:2004   UGGCUUCAACUGUGCAGAG   2022 Target Full Sequence	2.5	PREDICTED: Glycine max lysine-specific demethylase JMJ18-like (LOC100784581), transcript variant X2, mRNA	lysine-specific demethylase JMJ18-like(LOC100784581)	coding protein	psRNATarget
BT095201.1	ncRNA:19   ACCUAACUUGACACGUCUC   1   ||*||*||||||||||||* targets:403   UGAAUCGAACUGUGCAGAC   421 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-25G1 unknown mRNA	NA	coding protein	psRNATarget