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BaseInfo

ncRNA ID novel_gma_miR4005
Species Glycine max
Class miRNA
Genome position Chr8:37301687-37301768 [-]
Reference genome Glycine_max_v2.0
Source SRR1451680;SRR1451681
Length 21
Mature sequence(if miRNA) 1 - UCUUGUACAGUUGCGCUUUCU - 21
Stem-loop(if miRNA) -A            GUAGU    UUU  UAU  --U    AUU
  AGAGUGCGACUG     AGAG   AU   GG   GUUC   A
  ||||||||||||     ||||   ||   ||   ||||
  UUUCGCGUUGAC     UCUC   UG   UC   UAGG   G
UC            -AUGU    -UU  -UU  UUU    AUC
Stem-loop sequence AAGAGUGCGACUGGUAGUAGAGUUUAUUAUGGUGUUCAUUAGCUAGGAUUUUCUUUGUUUCUCUUGUACAGUUGCGCUUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583778.2
ncRNA:21   UCUUUCGCGUUGACAUGUUCU   1
  =**|||*|||||||||||||=
targets:3273   GUUAAGGGCAACUGUACAAGG   3293

3.0 PREDICTED: Glycine max glutamate receptor 2.7-like (LOC100780320), mRNA glutamate receptor 2.7-like(LOC100780320) coding protein psRNATarget