ncRNA ID | novel_gma_miR4002 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:27538793-27538847 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451680 |
Length | 20 |
Mature sequence(if miRNA) | 36 - AUAGAAAUUCUAGUGAUUAU - 55 |
Stem-loop(if miRNA) |
--             A       CUAA   AAUCACUAGAAUU UUAUAUA    G   ||||||||||||| |||||||    U   UUAGUGAUCUUAA GAUAUAU    A UA             A       AAAU |
Stem-loop sequence | AAUCACUAGAAUUAUUAUAUACUAAGUAUAAAUAUAUAGAAAUUCUAGUGAUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762114.1 |
|
2.5 | PREDICTED: Glycine max adenine phosphoribosyltransferase 1, chloroplastic-like (LOC100780728), transcript variant X2, mRNA | adenine phosphoribosyltransferase 1, chloroplastic-like(LOC100780728) | coding protein | psRNATarget |