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BaseInfo

ncRNA ID novel_gma_miR4002
Species Glycine max
Class miRNA
Genome position Chr5:27538793-27538847 [+]
Reference genome Glycine_max_v2.0
Source SRR1451680
Length 20
Mature sequence(if miRNA) 36 - AUAGAAAUUCUAGUGAUUAU - 55
Stem-loop(if miRNA) --             A       CUAA
  AAUCACUAGAAUU UUAUAUA    G
  ||||||||||||| |||||||    U
  UUAGUGAUCUUAA GAUAUAU    A
UA             A       AAAU
Stem-loop sequence AAUCACUAGAAUUAUUAUAUACUAAGUAUAAAUAUAUAGAAAUUCUAGUGAUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762114.1
ncRNA:20   UAUUAGUGAUCUUAAAGAUA   1
  |*||||||||||*|||||||
targets:565   AAAAUCACUAGAUUUUCUAU   584

2.5 PREDICTED: Glycine max adenine phosphoribosyltransferase 1, chloroplastic-like (LOC100780728), transcript variant X2, mRNA adenine phosphoribosyltransferase 1, chloroplastic-like(LOC100780728) coding protein psRNATarget