ncRNA ID | novel_gma_miR3998 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:48723365-48723416 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451680 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CUCUUGUUCGUUCGGGGCAA - 20 |
Stem-loop(if miRNA) |
--         --   UA  UG   GA   GCUUUGGAU  GCA  AG  GUU  A   |||||||||  |||  ||  |||   CGGGGCUUG  UGU  UC  CGA  G AA         CU   UC  GU   GG |
Stem-loop sequence | GCUUUGGAUGCAUAAGUGGUUGAAGGGAGCUGCUCUUGUUCGUUCGGGGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766433.1 |
|
3.0 | PREDICTED: Glycine max glycerol-3-phosphate acyltransferase, chloroplastic-like (LOC100789434), transcript variant X1, mRNA | glycerol-3-phosphate acyltransferase, chloroplastic-like(LOC100789434) | coding protein | psRNATarget | |||||||||
XM_003516910.3 |
|
3.0 | PREDICTED: Glycine max glycerol-3-phosphate acyltransferase, chloroplastic-like (LOC100789434), transcript variant X2, mRNA | glycerol-3-phosphate acyltransferase, chloroplastic-like(LOC100789434) | coding protein | psRNATarget |