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BaseInfo

ncRNA ID	novel_gma_miR3996
Species	Glycine max
Class	miRNA
Genome position	Chr3:32105393-32105488 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451680
Length	21
Mature sequence(if miRNA)	1 - CUGAUGACUGAGUGGUUUUCU - 21
Stem-loop(if miRNA)	-    CU    UG   U  -------U    ---        CCAA        GGAG  CACU  GUC UC        CACC   CCCAACCA    AGUGUGA  ||||  ||||  ||| ||        ||||   ||||||||    ||||||U  CUUU  GUGA  CAG AG        GUGG   GGGUUGGU    UCAUAUU U    UG    GU   U  UCUCUUUU    UUU        AUCG
Stem-loop sequence	GGAGCUCACUUGGUCUUCUCACCCCCAACCACCAAAGUGUGAUUUAUACUGCUAUGGUUGGGUUUGGUGUUUUCUCUGAUGACUGAGUGGUUUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006580424.2	ncRNA:21   UCUUUUGGUGAGUCAGUAGUC   1   |*|||=|||*||||||||||| targets:4038   ACAAAGCCAGUCAGUCAUCAG   4058 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100796396 (LOC100796396), transcript variant X2, mRNA	uncharacterized LOC100796396(LOC100796396)	coding protein	psRNATarget
XM_014775860.1	ncRNA:21   UCUUUUGGUGAGUCAGUAGUC   1   |*|||=|||*||||||||||| targets:4175   ACAAAGCCAGUCAGUCAUCAG   4195 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100796396 (LOC100796396), transcript variant X1, mRNA	uncharacterized LOC100796396(LOC100796396)	coding protein	psRNATarget
XM_006579819.2	ncRNA:21   UCUUUUGGUGAGUCAGUAGUC   1   =|=|=|=|||||||||||||| targets:1418   GGGAGAUCACUCAGUCAUCAG   1438 Target Full Sequence	3.0	PREDICTED: Glycine max probable disease resistance protein At5g66900 (LOC100816134), mRNA	probable disease resistance protein At5g66900(LOC100816134)	coding protein	psRNATarget
XM_006600948.2	ncRNA:21   UCUUUUGGUGAGUCAGUAGUC   1   =|=|=|=|||||||||||||| targets:1378   GGGAGAUCACUCAGUCAUCAG   1398 Target Full Sequence	3.0	PREDICTED: Glycine max probable disease resistance protein At5g66900 (LOC100809435), transcript variant X1, mRNA	probable disease resistance protein At5g66900(LOC100809435)	coding protein	psRNATarget