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BaseInfo

ncRNA ID	novel_gma_miR3993
Species	Glycine max
Class	miRNA
Genome position	Chr19:3114351-3114391 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451679
Length	20
Mature sequence(if miRNA)	22 - ACGCGUGUCAGACACCGGAC - 41
Stem-loop(if miRNA)	---       G     -  AC    CGGUGUC GACAC UG  A    ||||||| ||||| ||  C    GCCACAG CUGUG GC  A CAG       A     C  AU
Stem-loop sequence	CGGUGUCGGACACUGACACAUACGCGUGUCAGACACCGGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003545133.3	ncRNA:20   CAGGCCACAGACUGUGCGCA   1   ||||||||||*||||||||| targets:1146   GUCCGGUGUCCGACACGCGU   1165 Target Full Sequence	1.5	PREDICTED: Glycine max probable polygalacturonase At3g15720 (LOC100787282), mRNA	probable polygalacturonase At3g15720(LOC100787282)	coding protein	psRNATarget
XM_006594204.2	ncRNA:20   CAGGCCACAGACUGUGCGCA   1   ||||||||||*||||||||| targets:2275   GUCCGGUGUCCGACACGCGU   2294 Target Full Sequence	1.5	PREDICTED: Glycine max histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like (LOC100812749), mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like(LOC100812749)	coding protein	psRNATarget
XM_014766263.1	ncRNA:20   CAGGCCACAGACUGUGCGCA   1   *|=||*|||||||||||||| targets:747   AUUCGAUGUCUGACACGCGU   766 Target Full Sequence	2.0	PREDICTED: Glycine max adenylate isopentenyltransferase 5, chloroplastic-like (LOC100812928), partial mRNA	adenylate isopentenyltransferase 5, chloroplastic-like(LOC100812928)	coding protein	psRNATarget
XM_006589307.2	ncRNA:20   CAGGCCACAGACUGUGCGCA   1   |||=||||||*||||||||| targets:630   GUCUGGUGUCCGACACGCGU   649 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100791948 (LOC100791948), mRNA	uncharacterized LOC100791948(LOC100791948)	coding protein	psRNATarget
XM_003525712.3	ncRNA:20   CAGGCCACAGACUGUGCGCA   1   |||=||||||*||||||||| targets:2514   GUCUGGUGUCCGACACGCGU   2533 Target Full Sequence	2.5	PREDICTED: Glycine max protein NSP-INTERACTING KINASE 2-like (LOC100779591), mRNA	protein NSP-INTERACTING KINASE 2-like(LOC100779591)	coding protein	psRNATarget
XM_003553459.3	ncRNA:20   CAGGCCACAGACUGUGCGCA   1   ||=|||||||*||||||||| targets:3905   GUUCGGUGUCCGACACGCGU   3924 Target Full Sequence	2.5	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At4g08850 (LOC100809137), mRNA	probable LRR receptor-like serine/threonine-protein kinase At4g08850(LOC100809137)	coding protein	psRNATarget