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BaseInfo

ncRNA ID	novel_gma_miR3990
Species	Glycine max
Class	miRNA
Genome position	Chr19:36185535-36185745 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294486
Length	24
Mature sequence(if miRNA)	1 - AGCCUAGGGAGAAUCUGAAACGAC - 24
Stem-loop(if miRNA)	--    C     G     G       - C    A            C          UUU             UU                  AUUA  G      CA   CGUU CAGAU CUCCC AGGCUUC C GUCA UCGUUCCUCCUC AGUCUCCGUU   CCUUCCCUUCUCU  ACUCCUCCCGAGUAGCUG    CC UGAUGA  A   |||| ||||| ||||| ||||||| | |||| |||||||||||| ||||||||||   |||||||||||||  ||||||||||||||||||    || ||||||  G   GCAA GUCUA GAGGG UCCGAGG G CGGU AGCAAGGAGGAG UCAGAGGUAA   GGAAGGGAAGAGA  UGAGGAGGGCUCGUCGAC    GG ACUACU  U CA    A     A     A       A A    C            A          CGC             --                  ---A  G      UC
Stem-loop sequence	CGUUCCAGAUGCUCCCGAGGCUUCCCGUCAAUCGUUCCUCCUCCAGUCUCCGUUUUUCCUUCCCUUCUCUUUACUCCUCCCGAGUAGCUGAUUACCGUGAUGACAAGUCUUCAUCAGGGACAGCUGCUCGGGAGGAGUAGAGAAGGGAAGGCGCAAUGGAGACUAGAGGAGGAACGACUGGCAGAGGAGCCUAGGGAGAAUCUGAAACGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014768816.1	ncRNA:24   CAGCAAAGUCUAAGAGGGAUCCGA   1   |**|||||**|||||||||||||* targets:773   GCAGUUUCCAAUUCUCCCUAGGCA   796 Target Full Sequence	3.0	PREDICTED: Glycine max probable RNA-binding protein ARP1 (LOC100786226), transcript variant X1, mRNA	probable RNA-binding protein ARP1(LOC100786226)	coding protein	psRNATarget
XM_014777732.1	ncRNA:24   CAGCAAAGUCUAAGAGGGAUCCGA   1   |**|||||**|||||||||||||* targets:797   GCAGUUUCCAAUUCUCCCUAGGCA   820 Target Full Sequence	3.0	PREDICTED: Glycine max RNA-binding protein 24-like (LOC100782484), transcript variant X3, mRNA	RNA-binding protein 24-like(LOC100782484)	coding protein	psRNATarget
XM_014768817.1	ncRNA:24   CAGCAAAGUCUAAGAGGGAUCCGA   1   |**|||||**|||||||||||||* targets:907   GCAGUUUCCAAUUCUCCCUAGGCA   930 Target Full Sequence	3.0	PREDICTED: Glycine max probable RNA-binding protein ARP1 (LOC100786226), transcript variant X2, mRNA	probable RNA-binding protein ARP1(LOC100786226)	coding protein	psRNATarget
XM_006583143.2	ncRNA:24   CAGCAAAGUCUAAGAGGGAUCCGA   1   |**|||||**|||||||||||||* targets:865   GCAGUUUCCAAUUCUCCCUAGGCA   888 Target Full Sequence	3.0	PREDICTED: Glycine max RNA-binding protein 24-like (LOC100782484), transcript variant X2, mRNA	RNA-binding protein 24-like(LOC100782484)	coding protein	psRNATarget
XM_006583142.2	ncRNA:24   CAGCAAAGUCUAAGAGGGAUCCGA   1   |**|||||**|||||||||||||* targets:867   GCAGUUUCCAAUUCUCCCUAGGCA   890 Target Full Sequence	3.0	PREDICTED: Glycine max RNA-binding protein 24-like (LOC100782484), transcript variant X1, mRNA	RNA-binding protein 24-like(LOC100782484)	coding protein	psRNATarget