ncRNA ID | novel_gma_miR3989 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:1589521-1589599 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451679 |
Length | 19 |
Mature sequence(if miRNA) | 61 - UUAUUCGGUUGUUGUGUGA - 79 |
Stem-loop(if miRNA) |
--        -    CGUUC  UC     G U   AAAAAA   AUACAGCG CUGA     AG  UUAGU G AAU      A   |||||||| ||||     ||  ||||| | |||      A   UGUGUUGU GGCU     UC  AGUCG C UUG      A AG        U    --UAU  GA     G -   AAAAGG |
Stem-loop sequence | AUACAGCGCUGACGUUCAGUCUUAGUGGUAAUAAAAAAAAAGGAAAAGUUCGGCUGAAGCUUAUUCGGUUGUUGUGUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014777956.1 |
|
2.0 | PREDICTED: Glycine max tRNA (guanine-N(7)-)-methyltransferase-like (LOC100789050), transcript variant X2, mRNA | tRNA (guanine-N(7)-)-methyltransferase-like(LOC100789050) | coding protein | psRNATarget | |||||||||
XM_003528957.3 |
|
2.0 | PREDICTED: Glycine max tRNA (guanine-N(7)-)-methyltransferase-like (LOC100789050), transcript variant X1, mRNA | tRNA (guanine-N(7)-)-methyltransferase-like(LOC100789050) | coding protein | psRNATarget |