Search result

BaseInfo

ncRNA ID novel_gma_miR3989
Species Glycine max
Class miRNA
Genome position Chr18:1589521-1589599 [+]
Reference genome Glycine_max_v2.0
Source SRR1451679
Length 19
Mature sequence(if miRNA) 61 - UUAUUCGGUUGUUGUGUGA - 79
Stem-loop(if miRNA) --        -    CGUUC  UC     G U   AAAAAA
  AUACAGCG CUGA     AG  UUAGU G AAU      A
  |||||||| ||||     ||  ||||| | |||      A
  UGUGUUGU GGCU     UC  AGUCG C UUG      A
AG        U    --UAU  GA     G -   AAAAGG
Stem-loop sequence AUACAGCGCUGACGUUCAGUCUUAGUGGUAAUAAAAAAAAAGGAAAAGUUCGGCUGAAGCUUAUUCGGUUGUUGUGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777956.1
ncRNA:19   AGUGUGUUGUUGGCUUAUU   1
  |*|||*|||||||||||||
targets:43   UAACAAAACAACCGAAUAA   61

2.0 PREDICTED: Glycine max tRNA (guanine-N(7)-)-methyltransferase-like (LOC100789050), transcript variant X2, mRNA tRNA (guanine-N(7)-)-methyltransferase-like(LOC100789050) coding protein psRNATarget
XM_003528957.3
ncRNA:19   AGUGUGUUGUUGGCUUAUU   1
  |*|||*|||||||||||||
targets:40   UAACAAAACAACCGAAUAA   58

2.0 PREDICTED: Glycine max tRNA (guanine-N(7)-)-methyltransferase-like (LOC100789050), transcript variant X1, mRNA tRNA (guanine-N(7)-)-methyltransferase-like(LOC100789050) coding protein psRNATarget