ncRNA ID | novel_gma_miR3987 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:3737547-3737613 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451679;SRR1451681 |
Length | 20 |
Mature sequence(if miRNA) | 48 - AUCCGUGCACAAUAAGCCGA - 67 |
Stem-loop(if miRNA) |
--A          AUA    G     -  GGA        UCCGUGCACA   AGCC AUGCU CU   UCAUA    ||||||||||   |||| ||||| ||   ||||U    AGGCACGUGU   UUGG UACGA GG   AGUAA UAA          --G    -     C  --A     |
Stem-loop sequence | AUCCGUGCACAAUAAGCCGAUGCUCUGGAUCAUAUAAUGAAGGCAGCAUGGUUGUGUGCACGGAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003526861.3 |
|
3.0 | PREDICTED: Glycine max respiratory burst oxidase homolog protein C-like (LOC100793600), transcript variant X1, mRNA | respiratory burst oxidase homolog protein C-like(LOC100793600) | coding protein | psRNATarget |