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BaseInfo

ncRNA ID	novel_gma_miR3984
Species	Glycine max
Class	miRNA
Genome position	Chr17:210367-210574 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451679
Length	20
Mature sequence(if miRNA)	1 - CUGACAUUGGUAAUGGAUGG - 20
Stem-loop(if miRNA)	-    C -    UAA -     GCUUGGAUUUGAAAAAUGACACAUUUAUUUUUUUAAAUAAUUGAAUAGUGAGGUGGAAUUUUGGGCGUGUAGACUUGUUGAGGU  CUGA A UUGG   U GGAUG                                                                                    U  |||| | ||||   | |||||                                                                                    U  GGAC G AGUA   C GUUGA                                                                                    A G    - U    --- C     UGCCUUUAACAGUACUUUAUUUUGCAUUGUCCGUGGAUUUAACUUUUUGGUCUACUGUUCUUUUUACAUUAGAAUGUUUUUUUU
Stem-loop sequence	CUGACAUUGGUAAUGGAUGGCUUGGAUUUGAAAAAUGACACAUUUAUUUUUUUAAAUAAUUGAAUAGUGAGGUGGAAUUUUGGGCGUGUAGACUUGUUGAGGUUUAUUUUUUUUGUAAGAUUACAUUUUUCUUGUCAUCUGGUUUUUCAAUUUAGGUGCCUGUUACGUUUUAUUUCAUGACAAUUUCCGUAGUUGCCAUGAUGCAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY595419.1	ncRNA:20   GGUAGGUAAUGGUUACAGUC   1   *|||||||*||||||||||* targets:16   GCAUCCAUCACCAAUGUCAC   35 Target Full Sequence	2.5	Glycine max chalcone isomerase 1B2 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001249168.1	ncRNA:20   GGUAGGUAAUGGUUACAGUC   1   *|||||||*||||||||||* targets:16   GCAUCCAUCACCAAUGUCAC   35 Target Full Sequence	2.5	Glycine max chalcone isomerase 1B2 (CHI1B2), mRNA	chalcone isomerase 1B2(CHI1B2)	coding protein	psRNATarget
XM_003527511.3	ncRNA:20   GGUAGGUAAUGGUUACAGUC   1   ||||=|*||||||||||||* targets:1902   CCAUUCUUUACCAAUGUCAC   1921 Target Full Sequence	3.0	PREDICTED: Glycine max probable folate-biopterin transporter 8, chloroplastic (LOC100782464), mRNA	probable folate-biopterin transporter 8, chloroplastic(LOC100782464)	coding protein	psRNATarget