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BaseInfo

ncRNA ID	novel_gma_miR3969
Species	Glycine max
Class	miRNA
Genome position	Chr5:5440956-5440999 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451679
Length	20
Mature sequence(if miRNA)	25 - UGUGUGUGUGUGUGUGGGGU - 44
Stem-loop(if miRNA)	-UG G   GU         GU    U UGU  GUGUGUGGG  G    | |||  |||||||||  U    G ACA  UAUAUAUCU  G UUA G   AU         GU
Stem-loop sequence	UGUGUGUGUGUGUGUGGGGUGUGUGUCUAUAUAUUAACAGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003531351.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *||||||||||||||||||| targets:1275   CCCCCACACACACACACACA   1294 Target Full Sequence	0.0	PREDICTED: Glycine max probable mediator of RNA polymerase II transcription subunit 26c (LOC100796457), transcript variant X2, mRNA	probable mediator of RNA polymerase II transcription subunit 26c(LOC100796457)	coding protein	psRNATarget
XM_014778962.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *||||||||||||||||||| targets:1265   CCCCCACACACACACACACA   1284 Target Full Sequence	0.0	PREDICTED: Glycine max probable mediator of RNA polymerase II transcription subunit 26c (LOC100796457), transcript variant X1, mRNA	probable mediator of RNA polymerase II transcription subunit 26c(LOC100796457)	coding protein	psRNATarget
XM_003538175.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |=|||||||||||||||||| targets:2282   AUCCCACACACACACACACA   2301 Target Full Sequence	1.0	PREDICTED: Glycine max crossover junction endonuclease MUS81 (LOC100798497), mRNA	crossover junction endonuclease MUS81(LOC100798497)	coding protein	psRNATarget
XM_006594144.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|=||||||||||||||||| targets:315   UCUCCACACACACACACACA   334 Target Full Sequence	1.0	PREDICTED: Glycine max WUSCHEL-related homeobox 9-like (LOC100785125), mRNA	WUSCHEL-related homeobox 9-like(LOC100785125)	coding protein	psRNATarget
XM_003519077.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|=||||||||||||||||| targets:61   UCUCCACACACACACACACA   80 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100816406 (LOC100816406), mRNA	uncharacterized LOC100816406(LOC100816406)	coding protein	psRNATarget
XM_006578524.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|||||||||||||||||| targets:995   UUCCCACACACACACACACA   1014 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100816458 (LOC100816458), transcript variant X2, mRNA	uncharacterized LOC100816458(LOC100816458)	coding protein	psRNATarget
DQ340249.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*||||||||||||||||| targets:202   ACACCACACACACACACACA   221 Target Full Sequence	1.0	Glycine max cytochrome P450 monooxygenase CYP51G1 (CYP51G1) mRNA, partial cds	NA	coding protein	psRNATarget
BT099408.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |||*|||||||||||||||| targets:114   ACCACACACACACACACACA   133 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-23L6 unknown mRNA	NA	coding protein	psRNATarget
NM_001255889.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |*|||||||||||||||||| targets:27   AACCCACACACACACACACA   46 Target Full Sequence	1.0	Glycine max ubiquitin-conjugating enzyme E2 5-like (LOC100805356), mRNA	ubiquitin-conjugating enzyme E2 5-like(LOC100805356)	coding protein	psRNATarget
BT089181.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |*|||||||||||||||||| targets:27   AACCCACACACACACACACA   46 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-1E22 unknown mRNA	NA	coding protein	psRNATarget
XM_014775459.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *||||*|||||||||||||| targets:2906   CCCCCCCACACACACACACA   2925 Target Full Sequence	1.0	PREDICTED: Glycine max conserved oligomeric Golgi complex subunit 6 (LOC100776278), mRNA	conserved oligomeric Golgi complex subunit 6(LOC100776278)	coding protein	psRNATarget
XM_003518435.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|||||*||||||||||||| targets:53   CCCCCAAACACACACACACA   72 Target Full Sequence	1.0	PREDICTED: Glycine max rho GTPase-activating protein 7-like (LOC100820132), transcript variant X1, mRNA	rho GTPase-activating protein 7-like(LOC100820132)	coding protein	psRNATarget
XM_006575560.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|||||*||||||||||||| targets:52   CCCCCAAACACACACACACA   71 Target Full Sequence	1.0	PREDICTED: Glycine max rho GTPase-activating protein 7-like (LOC100820132), transcript variant X2, mRNA	rho GTPase-activating protein 7-like(LOC100820132)	coding protein	psRNATarget
XM_003550359.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *||||||=|||||||||||| targets:34   CCCCCACGCACACACACACA   53 Target Full Sequence	1.5	PREDICTED: Glycine max protein SHI RELATED SEQUENCE 1-like (LOC100807290), mRNA	protein SHI RELATED SEQUENCE 1-like(LOC100807290)	coding protein	psRNATarget
XM_003544747.3	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||||-|||||||||||||||| targets:206   ACCCUCACACACACACACACA   226 Target Full Sequence	2.0	PREDICTED: Glycine max probable pectin methyltransferase QUA2 (LOC100787635), transcript variant X1, mRNA	probable pectin methyltransferase QUA2(LOC100787635)	coding protein	psRNATarget
XM_006586629.2	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||||-|||||||||||||||| targets:341   ACCCACACACACACACACACA   361 Target Full Sequence	2.0	PREDICTED: Glycine max ubiquitin-conjugating enzyme E2 5-like (LOC100805356), transcript variant X1, mRNA	ubiquitin-conjugating enzyme E2 5-like(LOC100805356)	coding protein	psRNATarget
XM_014778169.1	ncRNA:20   UGG-GGUGUGUGUGUGUGUGU   1   |||-||||||||||||||||| targets:54   ACCACCACACACACACACACA   74 Target Full Sequence	2.0	PREDICTED: Glycine max cytokinesis protein sepA (LOC100305848), mRNA	cytokinesis protein sepA(LOC100305848)	coding protein	psRNATarget
XM_014772396.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   =||=||=||||||||||||| targets:64   GCCUCAUACACACACACACA   83 Target Full Sequence	2.0	PREDICTED: Glycine max B3 domain-containing transcription factor LEC2-like (LOC106797573), mRNA	B3 domain-containing transcription factor LEC2-like(LOC106797573)	coding protein	psRNATarget
XM_014776890.1	ncRNA:20   UGG-GGUGUGUGUGUGUGUGU   1   =||-||||||||||||||||| targets:1179   GCCACCACACACACACACACA   1199 Target Full Sequence	2.0	PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 5-like (LOC100793266), transcript variant X2, mRNA	protein FAR1-RELATED SEQUENCE 5-like(LOC100793266)	coding protein	psRNATarget
XM_006582752.2	ncRNA:20   UGG-GGUGUGUGUGUGUGUGU   1   =||-||||||||||||||||| targets:1055   GCCACCACACACACACACACA   1075 Target Full Sequence	2.0	PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 5-like (LOC100793266), transcript variant X1, mRNA	protein FAR1-RELATED SEQUENCE 5-like(LOC100793266)	coding protein	psRNATarget
AK286386.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:93   CUCUCACACACACACACACA   112 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-27-B12	NA	coding protein	psRNATarget
XM_003519471.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:229   CUCUCACACACACACACACA   248 Target Full Sequence	2.0	PREDICTED: Glycine max auxin response factor 6-like (LOC100809105), mRNA	auxin response factor 6-like(LOC100809105)	coding protein	psRNATarget
XM_006576700.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:154   CUCUCACACACACACACACA   173 Target Full Sequence	2.0	PREDICTED: Glycine max 4-alpha-glucanotransferase DPE2-like (LOC100809128), transcript variant X1, mRNA	4-alpha-glucanotransferase DPE2-like(LOC100809128)	coding protein	psRNATarget
XM_014773716.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:155   CUCUCACACACACACACACA   174 Target Full Sequence	2.0	PREDICTED: Glycine max 4-alpha-glucanotransferase DPE2-like (LOC100809128), transcript variant X2, mRNA	4-alpha-glucanotransferase DPE2-like(LOC100809128)	coding protein	psRNATarget
XM_003546458.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:191   CUCUCACACACACACACACA   210 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100808150 (LOC100808150), mRNA	uncharacterized LOC100808150(LOC100808150)	coding protein	psRNATarget
XM_003553045.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:55   CUCUCACACACACACACACA   74 Target Full Sequence	2.0	PREDICTED: Glycine max heat shock 70 kDa protein 16-like (LOC100808218), mRNA	heat shock 70 kDa protein 16-like(LOC100808218)	coding protein	psRNATarget
XM_006591174.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *==||||||||||||||||| targets:214   UUUCCACACACACACACACA   233 Target Full Sequence	2.0	PREDICTED: Glycine max 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like (LOC100800965), transcript variant X1, mRNA	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like(LOC100800965)	coding protein	psRNATarget
XM_006579608.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:171   CUCUCACACACACACACACA   190 Target Full Sequence	2.0	PREDICTED: Glycine max probable methyltransferase PMT14 (LOC100810763), transcript variant X2, mRNA	probable methyltransferase PMT14(LOC100810763)	coding protein	psRNATarget
AK286639.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:220   CUCUCACACACACACACACA   239 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-33-D19	NA	coding protein	psRNATarget
XM_003524391.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:217   CUCUCACACACACACACACA   236 Target Full Sequence	2.0	PREDICTED: Glycine max probable methyltransferase PMT14 (LOC100810763), transcript variant X1, mRNA	probable methyltransferase PMT14(LOC100810763)	coding protein	psRNATarget
XM_003542123.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:64   CUCUCACACACACACACACA   83 Target Full Sequence	2.0	PREDICTED: Glycine max calmodulin-binding protein 60 B (LOC100790087), mRNA	calmodulin-binding protein 60 B(LOC100790087)	coding protein	psRNATarget
XM_006592225.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:254   CUCUCACACACACACACACA   273 Target Full Sequence	2.0	PREDICTED: Glycine max protein UPSTREAM OF FLC-like (LOC100783687), transcript variant X1, mRNA	protein UPSTREAM OF FLC-like(LOC100783687)	coding protein	psRNATarget
XM_006592226.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:254   CUCUCACACACACACACACA   273 Target Full Sequence	2.0	PREDICTED: Glycine max protein UPSTREAM OF FLC-like (LOC100783687), transcript variant X2, mRNA	protein UPSTREAM OF FLC-like(LOC100783687)	coding protein	psRNATarget
XM_006601165.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:111   CUCUCACACACACACACACA   130 Target Full Sequence	2.0	PREDICTED: Glycine max protein indeterminate-domain 7-like (LOC100807813), transcript variant X1, mRNA	protein indeterminate-domain 7-like(LOC100807813)	coding protein	psRNATarget
XM_003518309.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:217   CUCUCACACACACACACACA   236 Target Full Sequence	2.0	PREDICTED: Glycine max probable acyl-activating enzyme 6 (LOC100789991), mRNA	probable acyl-activating enzyme 6(LOC100789991)	coding protein	psRNATarget
XM_006601166.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:112   CUCUCACACACACACACACA   131 Target Full Sequence	2.0	PREDICTED: Glycine max protein indeterminate-domain 7-like (LOC100807813), transcript variant X2, mRNA	protein indeterminate-domain 7-like(LOC100807813)	coding protein	psRNATarget
XM_003554732.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:306   CUCUCACACACACACACACA   325 Target Full Sequence	2.0	PREDICTED: Glycine max rho GTPase-activating protein 3-like (LOC100800436), mRNA	rho GTPase-activating protein 3-like(LOC100800436)	coding protein	psRNATarget
XM_003555588.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:1813   CUCUCACACACACACACACA   1832 Target Full Sequence	2.0	PREDICTED: Glycine max probable protein phosphatase 2C 38 (LOC100807559), mRNA	probable protein phosphatase 2C 38(LOC100807559)	coding protein	psRNATarget
XM_006574526.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|==|||||||||||||||| targets:1555   UCUUCACACACACACACACA   1574 Target Full Sequence	2.0	PREDICTED: Glycine max protein ALTERED XYLOGLUCAN 4-like (LOC100788415), mRNA	protein ALTERED XYLOGLUCAN 4-like(LOC100788415)	coding protein	psRNATarget
XM_006576192.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:275   CUCUCACACACACACACACA   294 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100815367 (LOC100815367), transcript variant X1, mRNA	uncharacterized LOC100815367(LOC100815367)	coding protein	psRNATarget
XM_006587158.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:334   CUCUCACACACACACACACA   353 Target Full Sequence	2.0	PREDICTED: Glycine max lipid phosphate phosphatase 2-like (LOC100782531), transcript variant X4, mRNA	lipid phosphate phosphatase 2-like(LOC100782531)	coding protein	psRNATarget
XM_006587157.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:334   CUCUCACACACACACACACA   353 Target Full Sequence	2.0	PREDICTED: Glycine max lipid phosphate phosphatase 2-like (LOC100782531), transcript variant X3, mRNA	lipid phosphate phosphatase 2-like(LOC100782531)	coding protein	psRNATarget
XM_006587156.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:333   CUCUCACACACACACACACA   352 Target Full Sequence	2.0	PREDICTED: Glycine max lipid phosphate phosphatase 2-like (LOC100782531), transcript variant X2, mRNA	lipid phosphate phosphatase 2-like(LOC100782531)	coding protein	psRNATarget
XM_003533876.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:329   CUCUCACACACACACACACA   348 Target Full Sequence	2.0	PREDICTED: Glycine max lipid phosphate phosphatase 2-like (LOC100782531), transcript variant X1, mRNA	lipid phosphate phosphatase 2-like(LOC100782531)	coding protein	psRNATarget
XM_014773380.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:200   CUCUCACACACACACACACA   219 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100815367 (LOC100815367), transcript variant X2, mRNA	uncharacterized LOC100815367(LOC100815367)	coding protein	psRNATarget
XM_006587159.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:332   CUCUCACACACACACACACA   351 Target Full Sequence	2.0	PREDICTED: Glycine max lipid phosphate phosphatase 2-like (LOC100782531), transcript variant X5, mRNA	lipid phosphate phosphatase 2-like(LOC100782531)	coding protein	psRNATarget
XM_003554379.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:465   CUCUCACACACACACACACA   484 Target Full Sequence	2.0	PREDICTED: Glycine max zinc finger A20 and AN1 domain-containing stress-associated protein 4-like (LOC100789686), mRNA	zinc finger A20 and AN1 domain-containing stress-associated protein 4-like(LOC100789686)	coding protein	psRNATarget
XM_003551926.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||| targets:74   CUCUCACACACACACACACA   93 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor PRE6-like (LOC100800940), mRNA	transcription factor PRE6-like(LOC100800940)	coding protein	psRNATarget
XM_003517967.3	ncRNA:20   UGGGGU-GUGUGUGUGUGUGU   1   *|||||-|||||||||||||| targets:213   UCCCCAACACACACACACACA   233 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100803220 (LOC100803220), transcript variant X1, mRNA	uncharacterized LOC100803220(LOC100803220)	coding protein	psRNATarget
XM_014774229.1	ncRNA:20   UGGGGU-GUGUGUGUGUGUGU   1   *|||||-|||||||||||||| targets:214   UCCCCAACACACACACACACA   234 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100803220 (LOC100803220), transcript variant X2, mRNA	uncharacterized LOC100803220(LOC100803220)	coding protein	psRNATarget
XM_014774233.1	ncRNA:20   UGGGGU-GUGUGUGUGUGUGU   1   *|||||-|||||||||||||| targets:214   UCCCCAACACACACACACACA   234 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100803220 (LOC100803220), transcript variant X4, mRNA	uncharacterized LOC100803220(LOC100803220)	coding protein	psRNATarget
XM_003536241.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*=|||||||||||||||| targets:5   ACGUCACACACACACACACA   24 Target Full Sequence	2.0	PREDICTED: Glycine max protein BTR1-like (LOC100783639), transcript variant X1, mRNA	protein BTR1-like(LOC100783639)	coding protein	psRNATarget
XM_006589291.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*=|||||||||||||||| targets:6   ACGUCACACACACACACACA   25 Target Full Sequence	2.0	PREDICTED: Glycine max protein BTR1-like (LOC100783639), transcript variant X2, mRNA	protein BTR1-like(LOC100783639)	coding protein	psRNATarget
XM_003531333.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*|=||||||||||||||| targets:72   ACACUACACACACACACACA   91 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized GTP-binding protein At5g64813-like (LOC100784826), mRNA	uncharacterized GTP-binding protein At5g64813-like(LOC100784826)	coding protein	psRNATarget
XM_006601134.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||=||*|||||||||||||| targets:57   ACUCCUCACACACACACACA   76 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100795601 (LOC100795601), transcript variant X1, mRNA	uncharacterized LOC100795601(LOC100795601)	coding protein	psRNATarget
XM_006601135.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||=||*|||||||||||||| targets:58   ACUCCUCACACACACACACA   77 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100795601 (LOC100795601), transcript variant X2, mRNA	uncharacterized LOC100795601(LOC100795601)	coding protein	psRNATarget
XM_003526257.3	ncRNA:20   UGGGGU-GUGUGUGUGUGUGU   1   *|||||-|||||||||||||| targets:86   UCCCCAACACACACACACACA   106 Target Full Sequence	2.0	PREDICTED: Glycine max myb-related protein Myb4-like (LOC100777621), mRNA	myb-related protein Myb4-like(LOC100777621)	coding protein	psRNATarget
BT099164.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *||=|||||||||||||||* targets:1691   CCCUCACACACACACACACC   1710 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-26H16 unknown mRNA	NA	coding protein	psRNATarget
XM_003525261.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|||||||||||||||||* targets:67   CUCCCACACACACACACACU   86 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor MYB1R1 (LOC778093), mRNA	transcription factor MYB1R1(LOC778093)	coding protein	psRNATarget
XM_003516855.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |**||||||||||||||||| targets:239   AAACCACACACACACACACA   258 Target Full Sequence	2.0	PREDICTED: Glycine max BEL1-like homeodomain protein 9 (LOC100805512), mRNA	BEL1-like homeodomain protein 9(LOC100805512)	coding protein	psRNATarget
XM_003556737.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   =|*=|||||||||||||||| targets:280   GCGUCACACACACACACACA   299 Target Full Sequence	2.0	PREDICTED: Glycine max protein CLT1, chloroplastic-like (LOC100780283), mRNA	protein CLT1, chloroplastic-like(LOC100780283)	coding protein	psRNATarget
XM_003546130.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||=|||||||||||||||=| targets:248   ACUCCACACACACACACAUA   267 Target Full Sequence	2.5	PREDICTED: Glycine max cucumber peeling cupredoxin-like (LOC100811710), mRNA	cucumber peeling cupredoxin-like(LOC100811710)	coding protein	psRNATarget
XM_003553293.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *||=||||||=||||||||| targets:170   CCCUCACACAUACACACACA   189 Target Full Sequence	2.5	PREDICTED: Glycine max putative ankyrin repeat protein RF_0381 (LOC100782232), mRNA	putative ankyrin repeat protein RF_0381(LOC100782232)	coding protein	psRNATarget
XM_003526969.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |||*||||||||||||||=| targets:90   ACCACACACACACACACAUA   109 Target Full Sequence	2.5	PREDICTED: Glycine max dof zinc finger protein DOF5.6-like (LOC100806697), mRNA	dof zinc finger protein DOF5.6-like(LOC100806697)	coding protein	psRNATarget
XM_003544356.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|||||||||||=||||||* targets:5   CCCCCACACACAUACACACC   24 Target Full Sequence	2.5	PREDICTED: Glycine max protein SHI RELATED SEQUENCE 7-like (LOC100794846), mRNA	protein SHI RELATED SEQUENCE 7-like(LOC100794846)	coding protein	psRNATarget
XM_003536632.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |||||||*|||||||||||* targets:455   ACCCCACCCACACACACACC   474 Target Full Sequence	2.5	PREDICTED: Glycine max adenylate isopentenyltransferase (LOC100813761), mRNA	adenylate isopentenyltransferase(LOC100813761)	coding protein	psRNATarget
XM_006576141.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |||||||*|||||||||||* targets:1319   ACCCCACUCACACACACACC   1338 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100527630 (LOC100527630), transcript variant X2, mRNA	uncharacterized LOC100527630(LOC100527630)	coding protein	psRNATarget
NM_001248244.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |||||||*|||||||||||* targets:1089   ACCCCACUCACACACACACC   1108 Target Full Sequence	2.5	Glycine max N-terminal nucleophile-hydrolase superfamily protein (LOC100527630), mRNA	uncharacterized LOC100527630(LOC100527630)	coding protein	psRNATarget
XM_006576142.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |||||||*|||||||||||* targets:945   ACCCCACUCACACACACACC   964 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100527630 (LOC100527630), transcript variant X3, mRNA	uncharacterized LOC100527630(LOC100527630)	coding protein	psRNATarget
NM_001251257.2	ncRNA:20   UGGG---GUGUGUGUGUGUGUGU   1   ||||---|||||||||||||||| targets:148   ACCCAUACACACACACACACACA   170 Target Full Sequence	3.0	Glycine max NAC domain protein (NAC23), mRNA	NAC domain protein(NAC23)	coding protein	psRNATarget
AK244781.1	ncRNA:20   UGGG---GUGUGUGUGUGUGUGU   1   ||||---|||||||||||||||| targets:96   ACCCAUACACACACACACACACA   118 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-13-O15	NA	coding protein	psRNATarget
XM_014779070.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   |=||-|||||||||||||||| targets:1666   AUCCACACACACACACACACA   1686 Target Full Sequence	3.0	PREDICTED: Glycine max cytochrome P450 71D10-like (LOC100796100), mRNA	cytochrome P450 71D10-like(LOC100796100)	coding protein	psRNATarget
XM_006598164.2	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||=|-|||||||||||||||| targets:62   ACUCACACACACACACACACA   82 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100810457 (LOC100810457), mRNA	uncharacterized LOC100810457(LOC100810457)	coding protein	psRNATarget
XM_014766030.1	ncRNA:20   UG-GGGUGUGUGUGUGUGUGU   1   ||-|=|||||||||||||||| targets:121   ACACUCACACACACACACACA   141 Target Full Sequence	3.0	PREDICTED: Glycine max GABA transporter 1-like (LOC100793688), mRNA	GABA transporter 1-like(LOC100793688)	coding protein	psRNATarget
NM_001248306.2	ncRNA:20   UG-GGGUGUGUGUGUGUGUGU   1   ||-|=|||||||||||||||| targets:13   ACACUCACACACACACACACA   33 Target Full Sequence	3.0	Glycine max RIN4c protein (RIN4c), mRNA	RIN4c protein(RIN4c)	coding protein	psRNATarget
XM_003542123.3	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:85   ACACACACACACACACACACA   105 Target Full Sequence	3.0	PREDICTED: Glycine max calmodulin-binding protein 60 B (LOC100790087), mRNA	calmodulin-binding protein 60 B(LOC100790087)	coding protein	psRNATarget
BT097951.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||==|||||||||||||||* targets:323   ACUUCACACACACACACACU   342 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-26O20 unknown mRNA	NA	coding protein	psRNATarget
XM_003517601.3	ncRNA:20   UGGGGUG-UGUGUGUGUGUGU   1   *||||||-||||||||||||| targets:167   CCCCCACCACACACACACACA   187 Target Full Sequence	3.0	PREDICTED: Glycine max 4-coumarate--CoA ligase-like 6 (LOC100804808), transcript variant X1, mRNA	4-coumarate--CoA ligase-like 6(LOC100804808)	coding protein	psRNATarget
XM_006572879.2	ncRNA:20   UGGGGUG-UGUGUGUGUGUGU   1   *||||||-||||||||||||| targets:166   CCCCCACCACACACACACACA   186 Target Full Sequence	3.0	PREDICTED: Glycine max 4-coumarate--CoA ligase-like 6 (LOC100804808), transcript variant X2, mRNA	4-coumarate--CoA ligase-like 6(LOC100804808)	coding protein	psRNATarget
XM_014767674.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   =||=-|||||||||||||||| targets:700   GCCUGCACACACACACACACA   720 Target Full Sequence	3.0	PREDICTED: Glycine max cucumisin-like (LOC106796115), mRNA	cucumisin-like(LOC106796115)	coding protein	psRNATarget
XM_006595957.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   =|==|||||||||||||||* targets:109   GCUUCACACACACACACACU   128 Target Full Sequence	3.0	PREDICTED: Glycine max protein indeterminate-domain 7-like (LOC100783557), mRNA	protein indeterminate-domain 7-like(LOC100783557)	coding protein	psRNATarget
XM_006605502.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   =||=||=||||||||||||* targets:274   GCCUCAUACACACACACACU   293 Target Full Sequence	3.0	PREDICTED: Glycine max B3 domain-containing transcription factor LEC2-like (LOC102662409), mRNA	B3 domain-containing transcription factor LEC2-like(LOC102662409)	coding protein	psRNATarget
AB084260.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|=|=|=||||||||||||| targets:14   UCUCUAUACACACACACACA   33 Target Full Sequence	3.0	Glycine max mRNA for basic 7S globulin isoform, complete cds	NA	coding protein	psRNATarget
NM_001250238.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *|=|=|=||||||||||||| targets:14   UCUCUAUACACACACACACA   33 Target Full Sequence	3.0	Glycine max basic 7S globulin isoform (LOC547485), mRNA	basic 7S globulin isoform(LOC547485)	coding protein	psRNATarget
XM_014776791.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:247   ACACACACACACACACACACA   267 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC106798975 (LOC106798975), mRNA	uncharacterized LOC106798975(LOC106798975)	coding protein	psRNATarget
XM_014776791.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:269   ACACACACACACACACACACA   289 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC106798975 (LOC106798975), mRNA	uncharacterized LOC106798975(LOC106798975)	coding protein	psRNATarget
XM_014776791.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:291   ACACACACACACACACACACA   311 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC106798975 (LOC106798975), mRNA	uncharacterized LOC106798975(LOC106798975)	coding protein	psRNATarget
XM_014768285.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:3159   ACAUUACACACACACACACA   3178 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X1, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768293.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:3155   ACAUUACACACACACACACA   3174 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X9, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768290.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:3148   ACAUUACACACACACACACA   3167 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X6, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768291.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:3101   ACAUUACACACACACACACA   3120 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X7, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768287.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:3018   ACAUUACACACACACACACA   3037 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X3, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768286.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:2972   ACAUUACACACACACACACA   2991 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X2, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768288.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:2831   ACAUUACACACACACACACA   2850 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X4, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768289.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:2734   ACAUUACACACACACACACA   2753 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X5, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
XM_014768292.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*==||||||||||||||| targets:2496   ACAUUACACACACACACACA   2515 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC102665522), transcript variant X8, mRNA	TMV resistance protein N-like(LOC102665522)	coding protein	psRNATarget
NM_001249544.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |*==|||||||||||||||| targets:37   AAUUCACACACACACACACA   56 Target Full Sequence	3.0	Glycine max MYB transcription factor MYB150 (MYB150), mRNA	MYB transcription factor MYB150(MYB150)	coding protein	psRNATarget
XM_006586654.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |=|=||*||||||||||||| targets:80   AUCUCAGACACACACACACA   99 Target Full Sequence	3.0	PREDICTED: Glycine max LRR receptor-like serine/threonine-protein kinase FEI 1 (LOC100819230), transcript variant X1, mRNA	LRR receptor-like serine/threonine-protein kinase FEI 1(LOC100819230)	coding protein	psRNATarget
XM_014775704.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |=|*=||||||||||||||| targets:294   AUCAUACACACACACACACA   313 Target Full Sequence	3.0	PREDICTED: Glycine max WD repeat-containing protein 53 (LOC106798742), mRNA	WD repeat-containing protein 53(LOC106798742)	coding protein	psRNATarget
XM_003541269.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |=|*=||||||||||||||| targets:3   AUCAUACACACACACACACA   22 Target Full Sequence	3.0	PREDICTED: Glycine max probable flavin-containing monooxygenase 1 (LOC100790266), mRNA	probable flavin-containing monooxygenase 1(LOC100790266)	coding protein	psRNATarget
BT099378.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   ||*=|=|||||||||||||| targets:1778   ACAUCGCACACACACACACA   1797 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-23J6 unknown mRNA	NA	coding protein	psRNATarget
XM_003541575.3	ncRNA:20   UGGGGU-GUGUGUGUGUGUGU   1   *|=|||-|||||||||||||| targets:193   UCUCCAUCACACACACACACA   213 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RHF1A-like (LOC100805449), transcript variant X1, mRNA	E3 ubiquitin-protein ligase RHF1A-like(LOC100805449)	coding protein	psRNATarget
XM_006594372.2	ncRNA:20   UGGGGU-GUGUGUGUGUGUGU   1   *|=|||-|||||||||||||| targets:204   UCUCCAUCACACACACACACA   224 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RHF1A-like (LOC100805449), transcript variant X2, mRNA	E3 ubiquitin-protein ligase RHF1A-like(LOC100805449)	coding protein	psRNATarget
XM_006600168.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |=|*=||||||||||||||| targets:170   AUCGUACACACACACACACA   189 Target Full Sequence	3.0	PREDICTED: Glycine max ribulose-phosphate 3-epimerase, chloroplastic-like (LOC100817791), transcript variant X1, mRNA	ribulose-phosphate 3-epimerase, chloroplastic-like(LOC100817791)	coding protein	psRNATarget
XM_006600169.2	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |=|*=||||||||||||||| targets:170   AUCGUACACACACACACACA   189 Target Full Sequence	3.0	PREDICTED: Glycine max ribulose-phosphate 3-epimerase, chloroplastic-like (LOC100817791), transcript variant X2, mRNA	ribulose-phosphate 3-epimerase, chloroplastic-like(LOC100817791)	coding protein	psRNATarget
XM_003533636.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   |=|=||*||||||||||||| targets:100   AUCUCAAACACACACACACA   119 Target Full Sequence	3.0	PREDICTED: Glycine max choline-phosphate cytidylyltransferase 1-like (LOC100786249), mRNA	choline-phosphate cytidylyltransferase 1-like(LOC100786249)	coding protein	psRNATarget
XM_014763038.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:3154   ACACACACACACACACACACA   3174 Target Full Sequence	3.0	PREDICTED: Glycine max serine-arginine protein 55-like (LOC102663994), transcript variant X2, mRNA	serine-arginine protein 55-like(LOC102663994)	coding protein	psRNATarget
XM_014763039.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:3154   ACACACACACACACACACACA   3174 Target Full Sequence	3.0	PREDICTED: Glycine max serine-arginine protein 55-like (LOC102663994), transcript variant X3, mRNA	serine-arginine protein 55-like(LOC102663994)	coding protein	psRNATarget
XM_003546372.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||* targets:83   CUCUCACACACACACACACC   102 Target Full Sequence	3.0	PREDICTED: Glycine max villin-4 (LOC100808499), transcript variant X1, mRNA	villin-4(LOC100808499)	coding protein	psRNATarget
XM_014767981.1	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *=|=|||||||||||||||* targets:83   CUCUCACACACACACACACC   102 Target Full Sequence	3.0	PREDICTED: Glycine max villin-4 (LOC100808499), transcript variant X2, mRNA	villin-4(LOC100808499)	coding protein	psRNATarget
XM_006599576.2	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:246   ACACACACACACACACACACA   266 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100793127 (LOC100793127), mRNA	uncharacterized LOC100793127(LOC100793127)	coding protein	psRNATarget
XM_014768010.1	ncRNA:20   UGGGGU-GUGUGUGUGUGUGU   1   ||*|||-|||||||||||||| targets:1962   ACACCAACACACACACACACA   1982 Target Full Sequence	3.0	PREDICTED: Glycine max extensin-2-like (LOC100816169), mRNA	extensin-2-like(LOC100816169)	coding protein	psRNATarget
XM_003548379.3	ncRNA:20   UGGGGUGUGUGUGUGUGUGU   1   *==||||||||||||||||* targets:61   CUUCCACACACACACACACU   80 Target Full Sequence	3.0	PREDICTED: Glycine max formin-like protein 1 (LOC100802678), mRNA	formin-like protein 1(LOC100802678)	coding protein	psRNATarget
XM_003528832.3	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   |||*-|||||||||||||||| targets:71   ACCAACACACACACACACACA   91 Target Full Sequence	3.0	PREDICTED: Glycine max homeobox-leucine zipper protein ANTHOCYANINLESS 2-like (LOC100811873), transcript variant X1, mRNA	homeobox-leucine zipper protein ANTHOCYANINLESS 2-like(LOC100811873)	coding protein	psRNATarget
XM_006583277.2	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   |||*-|||||||||||||||| targets:69   ACCAACACACACACACACACA   89 Target Full Sequence	3.0	PREDICTED: Glycine max homeobox-leucine zipper protein ANTHOCYANINLESS 2-like (LOC100811873), transcript variant X2, mRNA	homeobox-leucine zipper protein ANTHOCYANINLESS 2-like(LOC100811873)	coding protein	psRNATarget
XM_003538817.3	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:134   ACACACACACACACACACACA   154 Target Full Sequence	3.0	PREDICTED: Glycine max probable methyltransferase PMT27 (LOC100797433), mRNA	probable methyltransferase PMT27(LOC100797433)	coding protein	psRNATarget
AK285934.1	ncRNA:20   UGGG-GUGUGUGUGUGUGUGU   1   ||*|-|||||||||||||||| targets:2417   ACACACACACACACACACACA   2437 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-18-N14	NA	coding protein	psRNATarget