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BaseInfo

ncRNA ID novel_gma_miR3965
Species Glycine max
Class miRNA
Genome position Chr20:17132324-17132367 [-]
Reference genome Glycine_max_v2.0
Source SRR1451678;SRR1451680
Length 21
Mature sequence(if miRNA) 24 - CCCGCGUCGCCCUCCUGCCGA - 44
Stem-loop(if miRNA) --  C  -     CCU      G
  CC GC GUCGC   CCUGCC A
  || || |||||   ||||||
  GG UG CAGCG   GGAUGG A
GC  U  A     -UU      G
Stem-loop sequence CCCGCGUCGCCCUCCUGCCGAAGGGUAGGUUGCGACAGUUGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604953.2
ncRNA:21   AGCCGUCCUCCCGCUGCGCCC   1
  |||||=|||||||||||||*|
targets:543   UCGGCGGGAGGGCGACGCGAG   563

2.5 PREDICTED: Glycine max putative exosome complex component rrp40 (LOC100778661), mRNA putative exosome complex component rrp40(LOC100778661) coding protein psRNATarget