ncRNA ID | novel_gma_miR3963 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:56209049-56209106 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451678 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUAAGUUGUUCUCUCGUGGA - 20 |
Stem-loop(if miRNA) |
--     UUG    C     GA     AUG   UUAAG   UUCU UCGUG  UACUU   G   |||||   |||| |||||  |||||   AGUUU   AAGA AGCAC  AUGGA   A GA     UUG    A     --     ACG |
Stem-loop sequence | UUAAGUUGUUCUCUCGUGGAUACUUAUGGAGCAAGGUACACGAAAGAAGUUUUUGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520801.3 |
|
2.5 | PREDICTED: Glycine max protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like (LOC100803965), mRNA | protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like(LOC100803965) | coding protein | psRNATarget |