ncRNA ID | novel_gma_miR3959 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:210366-210575 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451678 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CCUGACAUUGGUAAUGGAUGG - 21 |
Stem-loop(if miRNA) |
--    A   --       GG    CUUGG     --     UGACACAUUUAUUUUUUUAAAUAAUUGAAUAGUGAGGUGGAAUUUUGGGCGUGUAGACUUGUUGAGGU   CCUG CAU  UGGUAAU  AUGG     AUUUG  AAAAA                                                                    U   |||| |||  |||||||  ||||     |||||  |||||   GGAC GUA  ACCGUUG  UGCC     UUAAC  UACUU                                                                    U AG    -   GU       -A    ----U     AG     UAUUUUGCAUUGUCCGUGGAUUUAACUUUUUGGUCUACUGUUCUUUUUACAUUAGAAUGUUUUUUUUA |
Stem-loop sequence | CCUGACAUUGGUAAUGGAUGGCUUGGAUUUGAAAAAUGACACAUUUAUUUUUUUAAAUAAUUGAAUAGUGAGGUGGAAUUUUGGGCGUGUAGACUUGUUGAGGUUUAUUUUUUUUGUAAGAUUACAUUUUUCUUGUCAUCUGGUUUUUCAAUUUAGGUGCCUGUUACGUUUUAUUUCAUGACAAUUUCCGUAGUUGCCAUGAUGCAGGGA |