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BaseInfo

ncRNA ID novel_gma_miR3959
Species Glycine max
Class miRNA
Genome position Chr17:210366-210575 [+]
Reference genome Glycine_max_v2.0
Source SRR1451678
Length 21
Mature sequence(if miRNA) 1 - CCUGACAUUGGUAAUGGAUGG - 21
Stem-loop(if miRNA) --    A   --       GG    CUUGG     --     UGACACAUUUAUUUUUUUAAAUAAUUGAAUAGUGAGGUGGAAUUUUGGGCGUGUAGACUUGUUGAGGU
  CCUG CAU  UGGUAAU  AUGG     AUUUG  AAAAA                                                                    U
  |||| |||  |||||||  ||||     |||||  |||||
  GGAC GUA  ACCGUUG  UGCC     UUAAC  UACUU                                                                    U
AG    -   GU       -A    ----U     AG     UAUUUUGCAUUGUCCGUGGAUUUAACUUUUUGGUCUACUGUUCUUUUUACAUUAGAAUGUUUUUUUUA
Stem-loop sequence CCUGACAUUGGUAAUGGAUGGCUUGGAUUUGAAAAAUGACACAUUUAUUUUUUUAAAUAAUUGAAUAGUGAGGUGGAAUUUUGGGCGUGUAGACUUGUUGAGGUUUAUUUUUUUUGUAAGAUUACAUUUUUCUUGUCAUCUGGUUUUUCAAUUUAGGUGCCUGUUACGUUUUAUUUCAUGACAAUUUCCGUAGUUGCCAUGAUGCAGGGA