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BaseInfo

ncRNA ID novel_gma_miR3951
Species Glycine max
Class miRNA
Genome position Chr11:29417156-29417251 [+]
Reference genome Glycine_max_v2.0
Source SRR1451678
Length 21
Mature sequence(if miRNA) 76 - UGGGUACCGUGAAUCCGCUGC - 96
Stem-loop(if miRNA) --   U       CCACUC     UGCUCUCAGGUCUUCCAAGCUUGCG
  AGC GGUUCAC      ACCUG                         U
  ||| |||||||      |||||
  UCG CUAAGUG      GGGUU                         U
CG   C       --CCAU     GAACAGGUUAAAGAUGGUUUUAGAU
Stem-loop sequence AGCUGGUUCACCCACUCACCUGUGCUCUCAGGUCUUCCAAGCUUGCGUUUAGAUUUUGGUAGAAAUUGGACAAGUUGGGUACCGUGAAUCCGCUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006601977.2
ncRNA:21   CGUCGCCUAAGUGCCAUGGGU   1
  ||||||||||||*||||||||
targets:373   GCAGCGGAUUCAAGGUACCCA   393

1.5 PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100776342), mRNA cysteine-rich receptor-like protein kinase 2(LOC100776342) coding protein psRNATarget
XM_014764180.1
ncRNA:21   CGUCGCCUAAGUGCCAUGGGU   1
  |||||||||||||||*|||||
targets:235   GCAGCGGAUUCACGGCACCCA   255

1.5 PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100815179), mRNA cysteine-rich receptor-like protein kinase 2(LOC100815179) coding protein psRNATarget