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BaseInfo

ncRNA ID	novel_gma_miR3948
Species	Glycine max
Class	miRNA
Genome position	Chr9:145380-145441 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451678
Length	19
Mature sequence(if miRNA)	44 - UGUGUCAGUUUCCUUCUGA - 62
Stem-loop(if miRNA)	--U    C    ---    U   --AA   AACA    GUGU AGUU   UCCU CUG    UGU    A    |||| ||||   |||| |||    |||    UACG UCAG   AGGG GAC    ACA    A GUG    U    GUU    -   CAAA   ACUC
Stem-loop sequence	UGUGUCAGUUUCCUUCUGAAUGUAACAAACUCAACAAAACCAGGGGAUUGGACUUGCAUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003530275.3	ncRNA:19   AGUCUUCCUUUGACUGUGU   1   |||||||*||||||||||| targets:2161   UCAGAAGAAAACUGACACA   2179 Target Full Sequence	1.5	PREDICTED: Glycine max plectin-like (LOC100820077), mRNA	plectin-like(LOC100820077)	coding protein	psRNATarget
XM_014763810.1	ncRNA:19   AGUCUUCCUUUGACUGUGU   1   *|||||||||||||||*|| targets:1499   CCAGAAGGAAACUGACUCA   1517 Target Full Sequence	2.5	PREDICTED: Glycine max polycomb group protein EMBRYONIC FLOWER 2-like (LOC100816782), transcript variant X2, mRNA	polycomb group protein EMBRYONIC FLOWER 2-like(LOC100816782)	coding protein	psRNATarget
XM_014763811.1	ncRNA:19   AGUCUUCCUUUGACUGUGU   1   *|||||||||||||||*|| targets:1456   CCAGAAGGAAACUGACUCA   1474 Target Full Sequence	2.5	PREDICTED: Glycine max polycomb group protein EMBRYONIC FLOWER 2-like (LOC100816782), transcript variant X3, mRNA	polycomb group protein EMBRYONIC FLOWER 2-like(LOC100816782)	coding protein	psRNATarget
XM_014763809.1	ncRNA:19   AGUCUUCCUUUGACUGUGU   1   *|||||||||||||||*|| targets:1509   CCAGAAGGAAACUGACUCA   1527 Target Full Sequence	2.5	PREDICTED: Glycine max polycomb group protein EMBRYONIC FLOWER 2-like (LOC100816782), transcript variant X1, mRNA	polycomb group protein EMBRYONIC FLOWER 2-like(LOC100816782)	coding protein	psRNATarget
XM_006586946.2	ncRNA:19   AGUCUUCCUUUGACUGUGU   1   |||*|||*||||||||||| targets:147   UCAAAAGAAAACUGACACA   165 Target Full Sequence	2.5	PREDICTED: Glycine max translation machinery-associated protein 22-like (LOC100780198), transcript variant X2, mRNA	translation machinery-associated protein 22-like(LOC100780198)	coding protein	psRNATarget
XM_003533706.3	ncRNA:19   AGUCUUCCUUUGACUGUGU   1   |||*|||*||||||||||| targets:144   UCAAAAGAAAACUGACACA   162 Target Full Sequence	2.5	PREDICTED: Glycine max translation machinery-associated protein 22-like (LOC100780198), transcript variant X1, mRNA	translation machinery-associated protein 22-like(LOC100780198)	coding protein	psRNATarget