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BaseInfo

ncRNA ID novel_gma_miR3946
Species Glycine max
Class miRNA
Genome position Chr1:49127642-49127697 [-]
Reference genome Glycine_max_v2.0
Source SRR1451678
Length 21
Mature sequence(if miRNA) 36 - UUGAAGCCGAAUUUGGGUCGA - 56
Stem-loop(if miRNA) --UU     -      UG   - G   CA
    GAAGC CGAAUU  GGU C AUU  C
    ||||| ||||||  ||| | |||
    CUUUG GUUUAA  UUA G UAA  U
GUUU     U      GU   A A   UG
Stem-loop sequence UUGAAGCCGAAUUUGGGUCGAUUCACUGUAAUAGAAUUUGAAUUUGUGUUUCUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773543.1
ncRNA:21   AGCUGGGUUUAAGCCGAAGUU   1
  |*|||||||||||*||||||*
targets:199   UAGACCCAAAUUCUGCUUCAC   219

2.5 PREDICTED: Glycine max uncharacterized LOC100817670 (LOC100817670), mRNA uncharacterized LOC100817670(LOC100817670) coding protein psRNATarget
XM_006594921.2
ncRNA:21   AGCUGGGUUUAAGCCGAAGUU   1
  *=*|||*|||||||||||||=
targets:568   CUUACCAAAAUUCGGCUUCAG   588

3.0 PREDICTED: Glycine max uncharacterized LOC100815599 (LOC100815599), mRNA uncharacterized LOC100815599(LOC100815599) coding protein psRNATarget