ncRNA ID | novel_gma_miR3939 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:6406474-6406560 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451677 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AAUACUGGGGACUUGUAGGC - 20 |
Stem-loop(if miRNA) |
--           CUUG     UUUUUU      CAUAUU  GUA   AAUACUGGGGA    UAGGC      UUAAAG      UG   G   |||||||||||    |||||      ||||||      ||   C   UUGUGACCUCU    GUCCG      AGUUUC      AC   A AA           -UCA     --UACU      -UCUUU  AAU |
Stem-loop sequence | AAUACUGGGGACUUGUAGGCUUUUUUUUAAAGCAUAUUUGGUAGCAUAACAUUUCUCUUUGAUCAUGCCUGACUUCUCCAGUGUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003534791.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100786266 (LOC100786266), mRNA | uncharacterized LOC100786266(LOC100786266) | coding protein | psRNATarget | |||||||||
XM_003546317.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100777661 (LOC100777661), transcript variant X1, mRNA | uncharacterized LOC100777661(LOC100777661) | coding protein | psRNATarget |