ncRNA ID | novel_gma_miR3934 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:45143445-45143521 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451677 |
Length | 20 |
Mature sequence(if miRNA) | 58 - CAUGAUGAUUGUGAUCACUG - 77 |
Stem-loop(if miRNA) |
--     U   UG -G       UU   -     CC  GU   CAUGA GAU  U  AUCACUG  CUG UUUUU  AU  U   ||||| |||  |  |||||||  ||| |||||  ||   GUAUU CUA  G  UAGUGAU  GAC AGAAA  UA  C GA     -   GU AG       CU   C     UU  AC |
Stem-loop sequence | CAUGAUGAUUGUGAUCACUGUUCUGUUUUUCCAUGUUCCAAUUUAAAGACCAGUCUAGUGAUGAGUGAUCUUAUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544410.3 |
|
1.5 | PREDICTED: Glycine max nuclear pore complex protein NUP133-like (LOC100780148), mRNA | nuclear pore complex protein NUP133-like(LOC100780148) | coding protein | psRNATarget | |||||||||
XM_003540696.3 |
|
2.5 | PREDICTED: Glycine max protein indeterminate-domain 9-like (LOC100781896), mRNA | protein indeterminate-domain 9-like(LOC100781896) | coding protein | psRNATarget |