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BaseInfo

ncRNA ID novel_gma_miR3933
Species Glycine max
Class miRNA
Genome position Chr18:7482749-7482848 [-]
Reference genome Glycine_max_v2.0
Source SRR1451677
Length 20
Mature sequence(if miRNA) 81 - AAGAGUGUGUUUGGAUAGAG - 100
Stem-loop(if miRNA) ---A    U            A         CUGAA      ---     AU
    AGAG GUGUUUGGAUAG GAAUUUUAA     GAAAGU   AAUUU  U
    |||| |||||||||||| |||||||||     ||||||   |||||
    UUUU CGUAGAUUUGUU CUUAAGAUU     UUUUUA   UUAAG  A
AGUA    U            A         UAAUG      AGU     AG
Stem-loop sequence AAGAGUGUGUUUGGAUAGAGAAUUUUAACUGAAGAAAGUAAUUUAUUAGAGAAUUUGAAUUUUUGUAAUUUAGAAUUCAUUGUUUAGAUGCUUUUUAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767860.1
ncRNA:20   GAGAUAGGUUUGUGUGAGAA   1
  ||||*|||||*|||||||||
targets:199   CUCUCUCCAACCACACUCUU   218

2.5 PREDICTED: Glycine max F-box protein At3g07870-like (LOC106796262), mRNA F-box protein At3g07870-like(LOC106796262) coding protein psRNATarget