ncRNA ID | novel_gma_miR3924 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:6734722-6734852 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 112 - AACGAAGUUUGAUUCAUUUU - 131 |
Stem-loop(if miRNA) |
--               UUCUA       AA     GU    UA   C  C    AG       AAA   AAUGAAUCAAACUUU     CAAGUUA  AUCAA  UAUG  CUU AG UUUU  AAAAGUU   U   |||||||||||||||     |||||||  |||||  ||||  ||| || ||||  |||||||   C   UUACUUAGUUUGAAG     GUUCAGU  UAGUU  AUGU  GGA UC AAAA  UUUUCGA   G UU               --CAA       --     GU    GC   A  U    AA       GAG |
Stem-loop sequence | AAUGAAUCAAACUUUUUCUACAAGUUAAAAUCAAGUUAUGUACUUCAGCUUUUAGAAAAGUUAAAUCGGAGAGCUUUUAAAAAAUCUAAGGCGUGUAUGUUGAUUGACUUGAACGAAGUUUGAUUCAUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006582823.2 |
|
1.5 | PREDICTED: Glycine max phosphopantothenoylcysteine decarboxylase-like (LOC100778368), transcript variant X2, mRNA | phosphopantothenoylcysteine decarboxylase-like(LOC100778368) | coding protein | psRNATarget |