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BaseInfo

ncRNA ID novel_gma_miR3919
Species Glycine max
Class miRNA
Genome position Chr5:4277024-4277077 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 34 - AUAUAUGAGGAUAUGUAAUUC - 54
Stem-loop(if miRNA) ---A         AGA     CAC   A
    UAUGUAUCU   AUGUG   UGG A
    |||||||||   |||||   ||| U
    AUGUAUAGG   UAUAU   AUC A
CUUA         -AG     -AC   U
Stem-loop sequence AUAUGUAUCUAGAAUGUGCACUGGAAUAUCUACAUAUAUGAGGAUAUGUAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003555995.3
ncRNA:21   CUUAAUGUAUAGGAGUAUAUA   1
  ||*||||||||||||||||||
targets:2290   GAUUUACAUAUCCUCAUAUAU   2310

1.0 PREDICTED: Glycine max primary amine oxidase-like (LOC100802062), transcript variant X1, mRNA primary amine oxidase-like(LOC100802062) coding protein psRNATarget