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BaseInfo

ncRNA ID novel_gma_miR3918
Species Glycine max
Class miRNA
Genome position Chr1:48718068-48718140 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 53 - UCAGCUGUUUGUCUAUGUUUU - 73
Stem-loop(if miRNA) --UCA       G              -U G   AAU
     GCUGUUU UCUAUGUUUUUAGU  U AUC   A
     ||||||| ||||||||||||||  | |||   G
     UGAUAGA AGGUGCAAAGAUUA  G UGG   A
GAUCA       -              UC G   GGU
Stem-loop sequence UCAGCUGUUUGUCUAUGUUUUUAGUUUGAUCAAUAGAUGGGGUGGCUAUUAGAAACGUGGAAGAUAGUACUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT095740.1
ncRNA:21   UUUUGUAUCUGUUUGUCGACU   1
  |||||||||||||||||=|||
targets:109   AAAACAUAGACAAACAGUUGA   129

1.5 Soybean clone JCVI-FLGm-19F24 unknown mRNA NA coding protein psRNATarget
AK245062.1
ncRNA:21   UUUUGUAUCUGUUUGUCGACU   1
  *=||*|||*||||||||||||
targets:762   UGAAGAUACACAAACAGCUGA   782

2.5 Glycine max cDNA, clone: GMFL01-20-C05 NA coding protein psRNATarget