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BaseInfo

ncRNA ID novel_gma_miR3917
Species Glycine max
Class miRNA
Genome position Chr5:17489932-17490001 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 51 - CAAAAUCAAGGCCUAAAAAA - 70
Stem-loop(if miRNA) --CA    C         AAA     UAAAAAAUAG
    AAAU AAGGCCUAA   AUCAU          A
    |||| |||||||||   |||||          C
    UUUA UUCUGGAUU   UAGUA          A
UAGA    A         ---     UGUACACAAA
Stem-loop sequence CAAAAUCAAGGCCUAAAAAAUCAUUAAAAAAUAGACAAAACACAUGUAUGAUUUAGGUCUUAAUUUAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003546070.3
ncRNA:20   AAAAAAUCCGGAACUAAAAC   1
  |**||*||||||||||||||
targets:457   UGCUUGAGGCCUUGAUUUUG   476

3.0 PREDICTED: Glycine max BI1-like protein (LOC100779265), mRNA BI1-like protein(LOC100779265) coding protein psRNATarget