ncRNA ID | novel_gma_miR3916 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:24734895-24734969 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 21 |
Mature sequence(if miRNA) | 55 - UUUGGAUUCAUAGCAUGUUUG - 75 |
Stem-loop(if miRNA) |
--     A   A    A  --      U      CAAUU   UUUGG UUC UAGC UG  UUUGGA UUGAUU     U   ||||| ||| |||| ||  |||||| ||||||   AAAUC AAG GUUG AC  AAACCU AACUAA     U CA     G   -    C  CA      U      UACUG |
Stem-loop sequence | UUUGGAUUCAUAGCAUGUUUGGAUUUGAUUCAAUUUUGUCAUAAUCAAUUCCAAAACCACGUUGGAAGCUAAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771792.1 |
|
1.5 | PREDICTED: Glycine max CLIP-associated protein-like (LOC100820523), transcript variant X2, mRNA | CLIP-associated protein-like(LOC100820523) | coding protein | psRNATarget | |||||||||
XM_003554267.3 |
|
1.5 | PREDICTED: Glycine max CLIP-associated protein-like (LOC100820523), transcript variant X1, mRNA | CLIP-associated protein-like(LOC100820523) | coding protein | psRNATarget | |||||||||
XM_014766249.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC106795636 (LOC106795636), mRNA | uncharacterized LOC106795636(LOC106795636) | coding protein | psRNATarget |