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BaseInfo

ncRNA ID novel_gma_miR3916
Species Glycine max
Class miRNA
Genome position Chr5:24734895-24734969 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 55 - UUUGGAUUCAUAGCAUGUUUG - 75
Stem-loop(if miRNA) --     A   A    A  --      U      CAAUU
  UUUGG UUC UAGC UG  UUUGGA UUGAUU     U
  ||||| ||| |||| ||  |||||| ||||||
  AAAUC AAG GUUG AC  AAACCU AACUAA     U
CA     G   -    C  CA      U      UACUG
Stem-loop sequence UUUGGAUUCAUAGCAUGUUUGGAUUUGAUUCAAUUUUGUCAUAAUCAAUUCCAAAACCACGUUGGAAGCUAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771792.1
ncRNA:21   GUUUGUACGAUACUUAGGUUU   1
  |||||||||||||||||||=|
targets:3012   CAAACAUGCUAUGAAUCCAGA   3032

1.5 PREDICTED: Glycine max CLIP-associated protein-like (LOC100820523), transcript variant X2, mRNA CLIP-associated protein-like(LOC100820523) coding protein psRNATarget
XM_003554267.3
ncRNA:21   GUUUGUACGAUACUUAGGUUU   1
  |||||||||||||||||||=|
targets:3010   CAAACAUGCUAUGAAUCCAGA   3030

1.5 PREDICTED: Glycine max CLIP-associated protein-like (LOC100820523), transcript variant X1, mRNA CLIP-associated protein-like(LOC100820523) coding protein psRNATarget
XM_014766249.1
ncRNA:21   GUUUGUACGAUACUUAGGUUU   1
  **|||*||||||||||=||||
targets:72   GCAACUUGCUAUGAAUUCAAA   92

2.5 PREDICTED: Glycine max uncharacterized LOC106795636 (LOC106795636), mRNA uncharacterized LOC106795636(LOC106795636) coding protein psRNATarget