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BaseInfo

ncRNA ID	novel_gma_miR3908
Species	Glycine max
Class	miRNA
Genome position	Chr11:5538743-5538844 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - CUUGGAUCUUUCUUUUUUUC - 20
Stem-loop(if miRNA)	----CUU G    UU           -CUU     UUUCUUUUUAUCCCUUA        G AUCU  CUUUUUUUCCU    UGUAU                 A        | ||||  |||||||||||    |||||                 U        C UGGA  GAAAAAAGGGA    UAGUA                 U AAUAACG G    GG           AAUA     AAUAAUACUAAUACAUA
Stem-loop sequence	CUUGGAUCUUUCUUUUUUUCCUCUUUGUAUUUUCUUUUUAUCCCUUAAUUAUACAUAAUCAUAAUAAAUGAUAUAAAGGGAAAAAAGGGAGGUGCGCAAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779079.1	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   *||=|||||||||||||*|| targets:1187   CAAGAAAAGAAAGAUCCCAG   1206 Target Full Sequence	2.5	PREDICTED: Glycine max pinin (LOC100801958), mRNA	pinin(LOC100801958)	coding protein	psRNATarget
XM_006584887.2	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   *|||=|||||||*||||||| targets:848   UAAAGAAAGAAAUAUCCAAG   867 Target Full Sequence	2.5	PREDICTED: Glycine max phosphoglycerate mutase-like protein 1 (LOC100527095), transcript variant X2, mRNA	phosphoglycerate mutase-like protein 1(LOC100527095)	coding protein	psRNATarget
XM_003530959.3	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   *|||=|||||||*||||||| targets:844   UAAAGAAAGAAAUAUCCAAG   863 Target Full Sequence	2.5	PREDICTED: Glycine max phosphoglycerate mutase-like protein 1 (LOC100527095), transcript variant X1, mRNA	phosphoglycerate mutase-like protein 1(LOC100527095)	coding protein	psRNATarget
XM_006583714.2	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   *|||=|||||||*||||||| targets:836   UAAAGAAAGAAAUAUCCAAG   855 Target Full Sequence	2.5	PREDICTED: Glycine max phosphoglycerate mutase-like protein 1 (LOC100775510), transcript variant X2, mRNA	phosphoglycerate mutase-like protein 1(LOC100775510)	coding protein	psRNATarget
NM_001349720.1	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   ||*||=|||||||||||||* targets:403   GAUAAGAAGAAAGAUCCAAA   422 Target Full Sequence	3.0	Glycine max heavy metal-associated domain-containing protein (LOC100527826), mRNA	NA	coding protein	psRNATarget
XM_006584670.2	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   ||=||*|||||||||||||* targets:484   GAGAAUAAGAAAGAUCCAAA   503 Target Full Sequence	3.0	PREDICTED: Glycine max putative late blight resistance protein homolog R1B-19 (LOC100818139), mRNA	putative late blight resistance protein homolog R1B-19(LOC100818139)	coding protein	psRNATarget
BT092705.1	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   ||*||=|||||||||||||* targets:406   GAUAAGAAGAAAGAUCCAAA   425 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-11F21 unknown mRNA	NA	coding protein	psRNATarget
AK286961.1	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   |||=|*|||||||||||||* targets:345   GAAGACAAGAAAGAUCCAAA   364 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-41-B04	NA	coding protein	psRNATarget
BT092531.1	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   |||=|*|||||||||||||* targets:346   GAAGACAAGAAAGAUCCAAA   365 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-11M9 unknown mRNA	NA	coding protein	psRNATarget
NM_001248789.2	ncRNA:20   CUUUUUUUCUUUCUAGGUUC   1   |||=|*|||||||||||||* targets:344   GAAGACAAGAAAGAUCCAAA   363 Target Full Sequence	3.0	Glycine max uncharacterized LOC100527669 (LOC100527669), mRNA	uncharacterized LOC100527669(LOC100527669)	coding protein	psRNATarget