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BaseInfo

ncRNA ID novel_gma_miR3897
Species Glycine max
Class miRNA
Genome position Chr4:32383501-32383595 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 76 - UAAGAGUAGAUUAAAAAAAA - 95
Stem-loop(if miRNA) --            A       A A     AUU    CUU   U UA
  UAAGAGUAGAUU AAAAAAA U AACCG   AAAU   AGA C  C
  |||||||||||| ||||||| | |||||   ||||   ||| |  A
  GUUCUCAUCUAG UUUUUUU A UUGGU   UUUA   UCU G  C
AA            A       A C     AUC    CGU   U UU
Stem-loop sequence UAAGAGUAGAUUAAAAAAAAAUAAACCGAUUAAAUCUUAGAUCUACACUUGUUCUUGCAUUUCUAUGGUUCAAUUUUUUUAGAUCUACUCUUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245253.1
ncRNA:20   AAAAAAAAUUAGAUGAGAAU   1
  |||||||||||*|||||||=
targets:506   UUUUUUUUAAUAUACUCUUG   525

2.5 Glycine max cDNA, clone: GMFL01-25-B16 NA coding protein psRNATarget
XM_006590719.2
ncRNA:20   AAAAAAAAUUAGAUGAGAAU   1
  |||*||||||||||||*|||
targets:1810   UUUAUUUUAAUCUACUGUUA   1829

2.5 PREDICTED: Glycine max lysine histidine transporter-like 8 (LOC100817315), mRNA lysine histidine transporter-like 8(LOC100817315) coding protein psRNATarget