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BaseInfo

ncRNA ID	novel_gma_miR3893
Species	Glycine max
Class	miRNA
Genome position	Chr4:49757870-49757919 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	1 - UGGCUUUGCUAUGUUAUUUC - 20
Stem-loop(if miRNA)	--C       C  G -C     CUAC    AUGAUAU AG A  GCCAU    C    ||||||| || |  |||||    UAUUGUA UC U  CGGUA    U CUU       -  G UU     UUUU
Stem-loop sequence	CAUGAUAUCAGGACGCCAUCUACCUUUUUAUGGCUUUGCUAUGUUAUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT092769.1	ncRNA:20   CUUUAUUGUAUCGUUUCGGU   1   *||*|=|||||||||||||| targets:410   UAAUUGACAUAGCAAAGCCA   429 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-22H23 unknown mRNA	NA	coding protein	psRNATarget
NM_001255593.1	ncRNA:20   CUUUAUUGUAUCGUUUCGGU   1   *||*|=|||||||||||||| targets:422   UAAUUGACAUAGCAAAGCCA   441 Target Full Sequence	2.0	Glycine max prolyl 4-hydroxylase subunit alpha-1-like (LOC100806046), mRNA	prolyl 4-hydroxylase subunit alpha-1-like(LOC100806046)	coding protein	psRNATarget
BT098832.1	ncRNA:20   CUUUAUUGUAUCGUUUCGGU   1   *||*|=|||||||||||||| targets:422   UAAUUGACAUAGCAAAGCCA   441 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-13I1 unknown mRNA	NA	coding protein	psRNATarget
XM_003538844.3	ncRNA:20   CUUUAUUGUAUCGUUUCGGU   1   *||*|=|||||||||||||| targets:408   UAAUUGACAUAGCAAAGCCA   427 Target Full Sequence	2.0	PREDICTED: Glycine max probable prolyl 4-hydroxylase 10 (LOC100527885), mRNA	probable prolyl 4-hydroxylase 10(LOC100527885)	coding protein	psRNATarget
XM_003544647.3	ncRNA:20   CUUUAUUGUAUCGUUUCGGU   1   *|||*|||||||=||||||| targets:580   UAAACAACAUAGUAAAGCCA   599 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100777123 (LOC100777123), transcript variant X3, mRNA	uncharacterized LOC100777123(LOC100777123)	coding protein	psRNATarget
XM_006595638.2	ncRNA:20   CUUUAUUGUAUCGUUUCGGU   1   *|||*|||||||=||||||| targets:647   UAAACAACAUAGUAAAGCCA   666 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100777123 (LOC100777123), transcript variant X1, mRNA	uncharacterized LOC100777123(LOC100777123)	coding protein	psRNATarget
XM_006595639.2	ncRNA:20   CUUUAUUGUAUCGUUUCGGU   1   *|||*|||||||=||||||| targets:699   UAAACAACAUAGUAAAGCCA   718 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100777123 (LOC100777123), transcript variant X2, mRNA	uncharacterized LOC100777123(LOC100777123)	coding protein	psRNATarget