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BaseInfo

ncRNA ID novel_gma_miR3891
Species Glycine max
Class miRNA
Genome position Chr4:2884699-2884757 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 40 - CAAUGCAGAUUGUGUAACCA - 59
Stem-loop(if miRNA) --      G   A    C   AA  A   A
  GUUGCG AAU UUGC UUG  GG GGA A
  |||||| ||| |||| |||  || |||
  CAAUGU UUA GACG AAC  CC CCU C
AC      G   -    U   GA  A   G
Stem-loop sequence GUUGCGGAAUAUUGCCUUGAAGGAGGAAACGUCCACCAGCAAUGCAGAUUGUGUAACCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003546938.3
ncRNA:20   ACCAAUGUGUUAGACGUAAC   1
  *|||||*||||||*||||||
targets:123   AGGUUAGACAAUCAGCAUUG   142

2.5 PREDICTED: Glycine max protein STRICTOSIDINE SYNTHASE-LIKE 13 (LOC100808153), mRNA protein STRICTOSIDINE SYNTHASE-LIKE 13(LOC100808153) coding protein psRNATarget