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BaseInfo

ncRNA ID novel_gma_miR3886
Species Glycine max
Class miRNA
Genome position Chr11:2754230-2754407 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 159 - UCAUAUAUUUUAAAUUUUGU - 178
Stem-loop(if miRNA) -   -        AAA       G     AAAUAGG  GG   G     AG    GAAAAAAGAAAAAAUUUGAAUUUGAUGAAUGUUGGA
 UCA UAUAUUUU   UUUUGUU UUUCC       AU  CCU AAGAG  UUUU                                    U
 ||| ||||||||   ||||||| |||||       ||  ||| |||||  ||||
 AGU GUAUGGAA   AAAACAG AAAGG       UG  GGA UUCUU  UAAG                                    A
G   U        -CG       -     -AGAAGA  AA   G     -G    AUAUUACUAUAUUAGUUUAGCUCGAAGUCGGGUUUU
Stem-loop sequence UCAUAUAUUUUAAAUUUUGUUGUUUCCAAAUAGGAUGGCCUGAAGAGAGUUUUGAAAAAAGAAAAAAUUUGAAUUUGAUGAAUGUUGGAUAUUUUGGGCUGAAGCUCGAUUUGAUUAUAUCAUUAUAGAAUGUUCUUGAGGAAGUAGAAGAGGAAAGACAAAAGCAAGGUAUGUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516873.3
ncRNA:20   UGUUUUAAAUUUUAUAUACU   1
  |||||*|||||||||*||||
targets:1840   ACAAAUUUUAAAAUAAAUGA   1859

2.5 PREDICTED: Glycine max laccase-7-like (LOC100814779), mRNA laccase-7-like(LOC100814779) coding protein psRNATarget