ncRNA ID | novel_gma_miR3886 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:2754230-2754407 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 159 - UCAUAUAUUUUAAAUUUUGU - 178 |
Stem-loop(if miRNA) |
-   -        AAA       G     AAAUAGG  GG   G     AG    GAAAAAAGAAAAAAUUUGAAUUUGAUGAAUGUUGGA  UCA UAUAUUUU   UUUUGUU UUUCC       AU  CCU AAGAG  UUUU                                    U  ||| ||||||||   ||||||| |||||       ||  ||| |||||  ||||  AGU GUAUGGAA   AAAACAG AAAGG       UG  GGA UUCUU  UAAG                                    A G   U        -CG       -     -AGAAGA  AA   G     -G    AUAUUACUAUAUUAGUUUAGCUCGAAGUCGGGUUUU |
Stem-loop sequence | UCAUAUAUUUUAAAUUUUGUUGUUUCCAAAUAGGAUGGCCUGAAGAGAGUUUUGAAAAAAGAAAAAAUUUGAAUUUGAUGAAUGUUGGAUAUUUUGGGCUGAAGCUCGAUUUGAUUAUAUCAUUAUAGAAUGUUCUUGAGGAAGUAGAAGAGGAAAGACAAAAGCAAGGUAUGUUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516873.3 |
|
2.5 | PREDICTED: Glycine max laccase-7-like (LOC100814779), mRNA | laccase-7-like(LOC100814779) | coding protein | psRNATarget |