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BaseInfo

ncRNA ID	novel_gma_miR3885
Species	Glycine max
Class	miRNA
Genome position	Chr3:34150785-34150832 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	21
Mature sequence(if miRNA)	1 - CUUGUAUUAGGACACCAUAGC - 21
Stem-loop(if miRNA)	--     C  -        CU  AC   UAUGG UG CCUAAUAC  GC  U   ||||| || ||||||||  ||   AUACC AC GGAUUAUG  CG  A CG     -  A        UU  AA
Stem-loop sequence	UAUGGCUGCCUAAUACCUGCACUAAAGCUUGUAUUAGGACACCAUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK287330.1	ncRNA:21   CGAUACCACAGGAUUAUGUUC   1   *||||||*||||||||||||| targets:1215   CCUAUGGAGUCCUAAUACAAG   1235 Target Full Sequence	1.0	Glycine max cDNA, clone: GMFL01-49-P24	NA	coding protein	psRNATarget
XM_014773715.1	ncRNA:21   CGAUACCACAGGAUUAUGUUC   1   **||||||*|||||||||||| targets:2704   AAUAUGGUAUCCUAAUACAAG   2724 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized mitochondrial protein AtMg00810-like (LOC106798080), mRNA	uncharacterized mitochondrial protein AtMg00810-like(LOC106798080)	coding protein	psRNATarget
NM_001254291.2	ncRNA:21   CGAUACCACAGGAUUAUGUUC   1   **||||*|||||||||*|||| targets:203   AGUAUGCUGUCCUAAUUCAAG   223 Target Full Sequence	2.5	Glycine max aspartate carbamoyltransferase 2, chloroplastic-like (LOC100815285), mRNA	aspartate carbamoyltransferase 2, chloroplastic-like(LOC100815285)	coding protein	psRNATarget
BT097628.1	ncRNA:21   CGAUACCACAGGAUUAUGUUC   1   **||||*|||||||||*|||| targets:205   AGUAUGCUGUCCUAAUUCAAG   225 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26E22 unknown mRNA	NA	coding protein	psRNATarget
XM_006584550.2	ncRNA:21   CGAUACCACAGGAUUAUGUUC   1   **||||*|||||||||*|||| targets:392   AGUAUGCUGUCCUAAUUCAAG   412 Target Full Sequence	2.5	PREDICTED: Glycine max aspartate carbamoyltransferase 2, chloroplastic-like (LOC100815285), transcript variant X1, mRNA	aspartate carbamoyltransferase 2, chloroplastic-like(LOC100815285)	coding protein	psRNATarget