ncRNA ID | novel_gma_miR3884 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:40640687-40640757 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 52 - UAGGGUUUCGAACGUAGCGC - 71 |
Stem-loop(if miRNA) |
--U     U  -  A   A    ------------UUU   A    AGGGU UC GA CGU GCGC               UGG G    ||||| || || ||| ||||               ||| C    UUUCA GG CU GCA CGCG               ACC U CGC     U  A  A   -    UUCAUAUUUAGCUUU   U |
Stem-loop sequence | UAGGGUUUCGAACGUAGCGCUUUUGGAGCUUCCAUUUCGAUUUAUACUUGCGCACGAUCAGGUACUUUCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602830.2 |
|
3.0 | PREDICTED: Glycine max probable mitochondrial chaperone BCS1-B (LOC100777208), mRNA | probable mitochondrial chaperone BCS1-B(LOC100777208) | coding protein | psRNATarget | |||||||||
XM_003533507.1 |
|
3.0 | PREDICTED: Glycine max probable mitochondrial chaperone BCS1-B (LOC100796308), mRNA | probable mitochondrial chaperone BCS1-B(LOC100796308) | coding protein | psRNATarget |