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BaseInfo

ncRNA ID novel_gma_miR3884
Species Glycine max
Class miRNA
Genome position Chr3:40640687-40640757 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 52 - UAGGGUUUCGAACGUAGCGC - 71
Stem-loop(if miRNA) --U     U  -  A   A    ------------UUU   A
   AGGGU UC GA CGU GCGC               UGG G
   ||||| || || ||| ||||               ||| C
   UUUCA GG CU GCA CGCG               ACC U
CGC     U  A  A   -    UUCAUAUUUAGCUUU   U
Stem-loop sequence UAGGGUUUCGAACGUAGCGCUUUUGGAGCUUCCAUUUCGAUUUAUACUUGCGCACGAUCAGGUACUUUCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602830.2
ncRNA:20   CGCGAUGCAAGCUUUGGGAU   1
  *=||*|*|||||||||||||
targets:753   CUGCGAGGUUCGAAACCCUA   772

3.0 PREDICTED: Glycine max probable mitochondrial chaperone BCS1-B (LOC100777208), mRNA probable mitochondrial chaperone BCS1-B(LOC100777208) coding protein psRNATarget
XM_003533507.1
ncRNA:20   CGCGAUGCAAGCUUUGGGAU   1
  *=||*|*|||||||||||||
targets:164   CUGCGAGGUUCGAAACCCUA   183

3.0 PREDICTED: Glycine max probable mitochondrial chaperone BCS1-B (LOC100796308), mRNA probable mitochondrial chaperone BCS1-B(LOC100796308) coding protein psRNATarget