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BaseInfo

ncRNA ID	novel_gma_miR3882
Species	Glycine max
Class	miRNA
Genome position	Chr3:43545997-43546082 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	67 - UCAAAACUGAUUCCAGUUCU - 86
Stem-loop(if miRNA)	--   A   UG  --    --   ---- UG  ACUGUUGUGGAGCAA   UCA AAC  AU  UCCA  GUU    C  UA               A   ||| |||  ||  ||||  |||    |  ||   AGU UUG  UA  AGGU  AGU    C  AG               A UU   G   GU  GA    AA   UAUA --  ACUGUCUCUGGUACU
Stem-loop sequence	UCAAAACUGAUUCCAGUUCUGUAACUGUUGUGGAGCAAAAUCAUGGUCUCUGUCAGACAUAUUGAAAUGGAAGAUUGGUUGUGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001252784.2	ncRNA:20   UCUUGACCUUAGUCAAAACU   1   *|||||*||=|||||||||| targets:73   UGAACUCGAGUCAGUUUUGA   92 Target Full Sequence	2.5	Glycine max F-box protein 7-like (LOC100786704), mRNA	F-box protein 7-like(LOC100786704)	coding protein	psRNATarget
AK245996.1	ncRNA:20   UCUUGACCUUAGUCAAAACU   1   *|||||*||=|||||||||| targets:104   UGAACUCGAGUCAGUUUUGA   123 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-48-G18	NA	coding protein	psRNATarget
XM_003523383.3	ncRNA:20   UCUUGACCUUAGUCAAAACU   1   *|||||*||=|||||||||| targets:178   UGAACUCGAGUCAGUUUUGA   197 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein 7 (LOC100800263), transcript variant X3, mRNA	F-box protein 7(LOC100800263)	coding protein	psRNATarget
XM_006578902.2	ncRNA:20   UCUUGACCUUAGUCAAAACU   1   *|||||*||=|||||||||| targets:178   UGAACUCGAGUCAGUUUUGA   197 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein 7 (LOC100800263), transcript variant X2, mRNA	F-box protein 7(LOC100800263)	coding protein	psRNATarget
XM_014774982.1	ncRNA:20   UCUUGACCUUAGUCAAAACU   1   *|||||*||=|||||||||| targets:178   UGAACUCGAGUCAGUUUUGA   197 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein 7 (LOC100800263), transcript variant X1, mRNA	F-box protein 7(LOC100800263)	coding protein	psRNATarget
XM_006580930.2	ncRNA:20   UCUUGACCUUAGUCAAAACU   1   *|||||*||=|||||||||| targets:268   UGAACUCGAGUCAGUUUUGA   287 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein 7-like (LOC100786704), transcript variant X1, mRNA	F-box protein 7-like(LOC100786704)	coding protein	psRNATarget