ncRNA ID | novel_gma_miR3879 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:38370494-38370553 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 21 |
Mature sequence(if miRNA) | 40 - UAUUUGUCGUCGGCGGUUUGC - 60 |
Stem-loop(if miRNA) |
---AU              GCAAA  G         CCGCCGACGGCAAG     UG CGGU      ||||||||||||||     || |||G      GGCGGCUGCUGUUU     GC GCCA CGUUU              AUGCG  G    |
Stem-loop sequence | AUCCGCCGACGGCAAGGCAAAUGGCGGUGACCGGCGGCGUAUUUGUCGUCGGCGGUUUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006576992.2 |
|
3.0 | PREDICTED: Glycine max serine/threonine-protein kinase CTR1-like (LOC100787894), transcript variant X2, mRNA | serine/threonine-protein kinase CTR1-like(LOC100787894) | coding protein | psRNATarget |