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BaseInfo

ncRNA ID novel_gma_miR3858
Species Glycine max
Class miRNA
Genome position Chr20:45497397-45497536 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - UUUCAUGGAUGUUGUUAGUG - 20
Stem-loop(if miRNA) --UU        -       G   CGU    C        A    A   C    A GUAUUACUAUUGAUUU
    UCAUGGAU GUUGUUA UGU   UCUC AAUUAAAA UGGC UUU AUCU G                U
    |||||||| ||||||| |||   |||| |||||||| |||| ||| |||| |
    GGUGUCUA CGACAAU ACA   AGAG UUAGUUUU GUUG AAA UAGA C                A
UUAU        A       G   ---    U        A    A   A    C UUUUAGUACCAUUGAU
Stem-loop sequence UUUCAUGGAUGUUGUUAGUGUCGUUCUCCAAUUAAAAAUGGCAUUUCAUCUAGGUAUUACUAUUGAUUUUAUAGUUACCAUGAUUUUCCAGAUAAAAAGUUGAUUUUGAUUUGAGAACAGUAACAGCAAUCUGUGGUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097784.1
ncRNA:20   GUGAUUGUUGUAGGUACUUU   1
  ||||||||||||||||||||
targets:73   CACUAACAACAUCCAUGAAA   92

0.0 Soybean clone JCVI-FLGm-22F1 unknown mRNA NA coding protein psRNATarget