ncRNA ID | novel_gma_miR3850 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:23051085-23051151 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUAUUUUUAGGACAAAACU - 20 |
Stem-loop(if miRNA) |
--    U  UU       A   -UU     -  U   UUUA UU  AGGACAA ACU   GGUGU UG U   |||| ||  ||||||| |||   ||||| || U   AGAU AA  UCUUGUU UGA   UCGUA AC C UA    U  UU       A   UUU     U  G |
Stem-loop sequence | UUUAUUUUUAGGACAAAACUUUGGUGUUGUUUCGCAUAUGCUUUUAGUAUUGUUCUUUAAUUAGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK285756.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-15-M13 | NA | coding protein | psRNATarget | |||||||||
XM_014778259.1 |
|
3.0 | PREDICTED: Glycine max probable beta-1,3-galactosyltransferase 2 (LOC100792032), transcript variant X1, mRNA | probable beta-1,3-galactosyltransferase 2(LOC100792032) | coding protein | psRNATarget |