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BaseInfo

ncRNA ID novel_gma_miR3848
Species Glycine max
Class miRNA
Genome position Chr11:21840511-21840592 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 1 - ACUGAGAUGAAACUCUAAUUU - 21
Stem-loop(if miRNA) --AUUUAAA                       UAAAAGUUU
         UUUCAUCUCGGUAAUCUGUGUUA         A
         |||||||||||||||||||||||
         AAAGUAGAGUCAUUAGAUGCAAU         C
UUUAAUCUC                       UAGAAAUUA
Stem-loop sequence AUUUAAAUUUCAUCUCGGUAAUCUGUGUUAUAAAAGUUUACAUUAAAGAUUAACGUAGAUUACUGAGAUGAAACUCUAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573286.2
ncRNA:21   UUUAAUCUCAAAGUAGAGUCA   1
  =||||||||||||||=|||||
targets:2099   GAAUUAGAGUUUCAUUUCAGU   2119

1.5 PREDICTED: Glycine max lactosylceramide 4-alpha-galactosyltransferase-like (LOC100781975), mRNA lactosylceramide 4-alpha-galactosyltransferase-like(LOC100781975) coding protein psRNATarget