Search result

BaseInfo

ncRNA ID	novel_gma_miR3846
Species	Glycine max
Class	miRNA
Genome position	Chr12:21193140-21193200 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294485;SRR1753108;SRR1451606;SRR1451608
Length	22
Mature sequence(if miRNA)	40 - UGUGGGGACUGUCGGCCUUGCC - 61
Stem-loop(if miRNA)	--    C   -   A      -AAUAU UUCU   CAAG GCC ACA UCCCCA      G    U   |||| ||| ||| ||||||      |   GUUC CGG UGU AGGGGU      C    A CC    -   C   C      GUCCUU UUUA
Stem-loop sequence	CAAGCGCCACAAUCCCCAAAUAUGUUCUUAAUUUCUUCCUGUGGGGACUGUCGGCCUUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014770985.1	ncRNA:22   CCGUUCCGGCUGUCAGGGGUGU   1   ||||||||||||=||||||||| targets:411   GGCAAGGCCGACGGUCCCCACA   432 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X1, mRNA	uncharacterized LOC106797154(LOC106797154)	coding protein	psRNATarget
XM_014770986.1	ncRNA:22   CCGUUCCGGCUGUCAGGGGUGU   1   ||||||||||||=||||||||| targets:411   GGCAAGGCCGACGGUCCCCACA   432 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X2, mRNA	uncharacterized LOC106797154(LOC106797154)	coding protein	psRNATarget
XM_006593125.2	ncRNA:22   CCGUUCCGGCUGUCAGGGGUGU   1   ||||||||||||=||||||||| targets:405   GGCAAGGCCGACGGUCCCCACA   426 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102661906 (LOC102661906), mRNA	uncharacterized LOC102661906(LOC102661906)	coding protein	psRNATarget
XM_014774672.1	ncRNA:22   CCGUUCCGGCUGUCAGGGGUGU   1   ||||||||||||=||||||||| targets:374   GGCAAGGCCGACGGUCCCCACA   395 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102661438 (LOC102661438), mRNA	uncharacterized LOC102661438(LOC102661438)	coding protein	psRNATarget
XM_014775152.1	ncRNA:22   CCGUUCCGGCUGUCAGGGGUGU   1   ||||||||||||=||||||||| targets:296   GGCAAGGCCGACGGUCCCCACA   317 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC106798555 (LOC106798555), mRNA	uncharacterized LOC106798555(LOC106798555)	coding protein	psRNATarget
XM_014762748.1	ncRNA:22   CCGUUCCGGCUGUCAGGGGUGU   1   ||*|||||||||=||||||||| targets:1680   GGGAAGGCCGACGGUCCCCACA   1701 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC106794854 (LOC106794854), mRNA	uncharacterized LOC106794854(LOC106794854)	coding protein	psRNATarget
XM_014767539.1	ncRNA:22   CCGUUCCGGCUGUCAGGGGUGU   1   |||||||=||||=||||||||| targets:175   GGCAAGGUCGACGGUCCCCACA   196 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106796075 (LOC106796075), mRNA	uncharacterized LOC106796075(LOC106796075)	coding protein	psRNATarget