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BaseInfo

ncRNA ID novel_gma_miR3845
Species Glycine max
Class miRNA
Genome position Chr20:26199693-26199784 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 73 - UAAGAGUAGAUUAAAAAAAA - 92
Stem-loop(if miRNA) --            -AA    --AA     AUU    - --UU   UCU
  UAAGAGUAGAUU   AAAA    AACCA   AAAU C    AUA   A
  ||||||||||||   ||||    |||||   |||| |    |||
  GUUCUCAUCUAG   UUUU    UUGGU   UUUA G    UGU   C
AA            AUG    AAAC     AUC    C UUCU   UCA
Stem-loop sequence UAAGAGUAGAUUAAAAAAAAAACCAAUUAAAUCUUAUAUCUACACUUGUUCUUGCAUUUCUAUGGUUCAAAUUUUGUAGAUCUACUCUUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245253.1
ncRNA:20   AAAAAAAAUUAGAUGAGAAU   1
  |||||||||||*|||||||=
targets:506   UUUUUUUUAAUAUACUCUUG   525

2.5 Glycine max cDNA, clone: GMFL01-25-B16 NA coding protein psRNATarget
XM_006590719.2
ncRNA:20   AAAAAAAAUUAGAUGAGAAU   1
  |||*||||||||||||*|||
targets:1810   UUUAUUUUAAUCUACUGUUA   1829

2.5 PREDICTED: Glycine max lysine histidine transporter-like 8 (LOC100817315), mRNA lysine histidine transporter-like 8(LOC100817315) coding protein psRNATarget