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BaseInfo

ncRNA ID novel_gma_miR3841
Species Glycine max
Class miRNA
Genome position Chr20:35229785-35229886 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 82 - CAAUUGUUAAUGUGAAAAUCA - 102
Stem-loop(if miRNA) --  A     AA  U       AU     ---A    AUACAC        CAC
  CA UUGUU  UG GAAAAUC  GGCUG    UAUU      ACAUGCAU   A
  || |||||  || |||||||  |||||    ||||      ||||||||
  GU AACAA  AC CUUUUAG  CUGGC    AUAA      UGUACGUA   A
GA  C     CC  U       --     AACG    -GAUUA        CUA
Stem-loop sequence CAAUUGUUAAUGUGAAAAUCAUGGCUGAUAUUAUACACACAUGCAUCACAAAUCAUGCAUGUAUUAGAAUAGCAACGGUCGAUUUUCUCACCAACAACUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516483.3
ncRNA:21   ACUAAAAGUGUAAUUGUUAAC   1
  |||||||||||||*||||||*
targets:20   UGAUUUUCACAUUUACAAUUA   40

2.5 PREDICTED: Glycine max serine acetyltransferase 2-like (LOC100796461), mRNA serine acetyltransferase 2-like(LOC100796461) coding protein psRNATarget
XM_003543337.2
ncRNA:21   ACUAAAAGUGUAAUUGUUAAC   1
  |||*||||||||*||||||||
targets:410   UGAAUUUCACAUCAACAAUUG   430

2.5 PREDICTED: Glycine max late embryogenesis abundant protein At1g64065-like (LOC100808471), mRNA late embryogenesis abundant protein At1g64065-like(LOC100808471) coding protein psRNATarget