ncRNA ID | novel_gma_miR3841 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:35229785-35229886 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 21 |
Mature sequence(if miRNA) | 82 - CAAUUGUUAAUGUGAAAAUCA - 102 |
Stem-loop(if miRNA) |
--  A     AA  U       AU     ---A    AUACAC        CAC   CA UUGUU  UG GAAAAUC  GGCUG    UAUU      ACAUGCAU   A   || |||||  || |||||||  |||||    ||||      ||||||||   GU AACAA  AC CUUUUAG  CUGGC    AUAA      UGUACGUA   A GA  C     CC  U       --     AACG    -GAUUA        CUA |
Stem-loop sequence | CAAUUGUUAAUGUGAAAAUCAUGGCUGAUAUUAUACACACAUGCAUCACAAAUCAUGCAUGUAUUAGAAUAGCAACGGUCGAUUUUCUCACCAACAACUGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516483.3 |
|
2.5 | PREDICTED: Glycine max serine acetyltransferase 2-like (LOC100796461), mRNA | serine acetyltransferase 2-like(LOC100796461) | coding protein | psRNATarget | |||||||||
XM_003543337.2 |
|
2.5 | PREDICTED: Glycine max late embryogenesis abundant protein At1g64065-like (LOC100808471), mRNA | late embryogenesis abundant protein At1g64065-like(LOC100808471) | coding protein | psRNATarget |