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BaseInfo

ncRNA ID novel_gma_miR3836
Species Glycine max
Class miRNA
Genome position Chr1:56022491-56022547 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 20
Mature sequence(if miRNA) 1 - AACUGAACUGAACUGAACCG - 20
Stem-loop(if miRNA) --UCAA              AA     U
      AGUUCAGUUCAGUU  CUGGU U
      ||||||||||||||  ||||| U
      UCAAGUCAAGUCAA  GAUUA A
GCCAAG              AA     A
Stem-loop sequence UCAAAGUUCAGUUCAGUUAACUGGUUUUAAAUUAGAAAACUGAACUGAACUGAACCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098192.1
ncRNA:20   GCCAAGUCAAGUCAAGUCAA   1
  =|*|||||||||*|||||||
targets:98   UGCUUCAGUUCAAUUCAGUU   117

2.5 Soybean clone JCVI-FLGm-26H3 unknown mRNA NA coding protein psRNATarget
XM_003530995.3
ncRNA:20   GCCAAGUCAAGUCAAGUCAA   1
  ***||||||||||||||||*
targets:51   AAUUUCAGUUCAGUUCAGUG   70

3.0 PREDICTED: Glycine max non-specific lipid-transfer protein-like protein At5g64080 (LOC100784108), mRNA non-specific lipid-transfer protein-like protein At5g64080(LOC100784108) coding protein psRNATarget