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BaseInfo

ncRNA ID	novel_gma_miR3830
Species	Glycine max
Class	miRNA
Genome position	Chr19:19747153-19747296 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	125 - AGGAAGCUUCCCAAUUAUGG - 144
Stem-loop(if miRNA)	--    -GA       G    -GAA   UU    --U   UU  U   UAA UG    GUCCU  A        A   GUGA   GGAAGCU UCCU    AGC  AAGA   GAG  UG GAG   U  UGAG     AG GGUGGGGG G   ||||   ||||||| ||||    |||  ||||   |||  || |||   |  ||||     || |||||||| A   UAUU   CCUUCGA AGGA    UCG  UUCU   CUC  AC UUC   A  AUUU     UC UCACCCCU C GG    AAC       -    AAUG   -U    CUU   UU  U   UAA GU    -AUGU  A        A
Stem-loop sequence	GUGAGAGGAAGCUGUCCUGAAAGCUUAAGAUGAGUUUGUGAGUAAUUGUGAGGUCCUAGAGGUGGGGGAGACAUCCCCACUACUUGUAUUUAUGAAAUCUUUCAUUCUCUUCUCUUUGCUGUAAAGGAAGCUUCCCAAUUAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003532574.3	ncRNA:20   GGUAUUAACCCUUCGAAGGA   1   =|||||||||||*||||||* targets:297   UCAUAAUUGGGAUGCUUCCC   316 Target Full Sequence	2.5	PREDICTED: Glycine max BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like (LOC100801433), mRNA	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like(LOC100801433)	coding protein	psRNATarget
XM_014768744.1	ncRNA:20   GGUAUUAACCCUUCGAAGGA   1   =||*|||||||||*|||||| targets:659   UCAAAAUUGGGAAUCUUCCU   678 Target Full Sequence	2.5	PREDICTED: Glycine max probable leucine-rich repeat receptor-like protein kinase At1g35710 (LOC100777354), mRNA	probable leucine-rich repeat receptor-like protein kinase At1g35710(LOC100777354)	coding protein	psRNATarget
XM_014769662.1	ncRNA:20   GGUAUUAACCCUUCGAAGGA   1   *|*|||||||||||||||*| targets:906   ACUUAAUUGGGAAGCUUCAU   925 Target Full Sequence	2.5	PREDICTED: Glycine max E3 ubiquitin-protein ligase RNF6-like (LOC100801106), mRNA	E3 ubiquitin-protein ligase RNF6-like(LOC100801106)	coding protein	psRNATarget
XM_006600894.2	ncRNA:20   GGUAUUAACCCUUCGAAGGA   1   *|*|||||||||||||||*| targets:1044   ACUUAAUUGGGAAGCUUCAU   1063 Target Full Sequence	2.5	PREDICTED: Glycine max E3 ubiquitin-protein ligase MBR2-like (LOC102666869), mRNA	E3 ubiquitin-protein ligase MBR2-like(LOC102666869)	coding protein	psRNATarget
XM_006575627.2	ncRNA:20   GGUAUUAACCCUUCGAAGGA   1   *==|*||||||||||||||| targets:516   GUGUCAUUGGGAAGCUUCCU   535 Target Full Sequence	3.0	PREDICTED: Glycine max F-box/LRR-repeat protein 13-like (LOC102664956), mRNA	F-box/LRR-repeat protein 13-like(LOC102664956)	coding protein	psRNATarget
AK245862.1	ncRNA:20   GGUAUUAACCCUUCGAAGGA   1   =*=|*||||||||||||||| targets:1682   UGGUCAUUGGGAAGCUUCCU   1701 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-43-K04	NA	coding protein	psRNATarget
XM_003526935.3	ncRNA:20   GGUAUUAACCCUUCGAAGGA   1   =*=|*||||||||||||||| targets:1744   UGGUCAUUGGGAAGCUUCCU   1763 Target Full Sequence	3.0	PREDICTED: Glycine max leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 (LOC100788151), mRNA	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1(LOC100788151)	coding protein	psRNATarget