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BaseInfo

ncRNA ID	novel_gma_miR3829
Species	Glycine max
Class	miRNA
Genome position	Chr1:55709402-55709549 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	21
Mature sequence(if miRNA)	128 - AGAAUGUGACACGUGAUAAUC - 148
Stem-loop(if miRNA)	--C                               C GU              GG     UCA    A   -AA AA    UGUCAUGUGUCACGUUCUUAUUGGAUGAUAA U  CACGUGUCAUGUUC  AUUGG   AUGA AAC   C  U    ||||||||||||||||||||||||||||||| |  ||||||||||||||  |||||   |||| |||   |    AUAGUGCACAGUGUAAGAAUAACCUACUAUU A  GUGUACAGUACAAG  UAACC   UACU UUG   G  U CUA                               A UG              AA     ---    A   ACG AG
Stem-loop sequence	CUGUCAUGUGUCACGUUCUUAUUGGAUGAUAACUGUCACGUGUCAUGUUCGGAUUGGUCAAUGAAAACAACAAUUGAGGCAGUUAUCAUCCAAUAAGAACAUGACAUGUGGUAAUUAUCAUCCAAUAAGAAUGUGACACGUGAUAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006586135.2	ncRNA:21   CUAAUAGUGCACAGUGUAAGA   1   **|||||||*||||||||||| targets:99   CUUUAUCACUUGUCACAUUCU   119 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014779469.1	ncRNA:21   CUAAUAGUGCACAGUGUAAGA   1   **|||||||*||||||||||| targets:99   CUUUAUCACUUGUCACAUUCU   119 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006602607.2	ncRNA:21   CUAAUAGUGCACAGUGUAAGA   1   ||||=||||||||||=||||| targets:565   GAUUGUCACGUGUCAUAUUCU   585 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA	transcription factor TGA7-like(LOC100794752)	coding protein	psRNATarget
XM_014765929.1	ncRNA:21   CUAAUAGUGCACAGUGUAAGA   1   **||*|||*|||||||||||| targets:2055   UUUUUUCAGGUGUCACAUUCU   2075 Target Full Sequence	2.5	PREDICTED: Glycine max plant intracellular Ras-group-related LRR protein 6-like (LOC100781571), transcript variant X2, mRNA	plant intracellular Ras-group-related LRR protein 6-like(LOC100781571)	coding protein	psRNATarget
XM_003543202.3	ncRNA:21   CUAAUAGUGCACAGUGUAAGA   1   **||*|||*|||||||||||| targets:2082   UUUUUUCAGGUGUCACAUUCU   2102 Target Full Sequence	2.5	PREDICTED: Glycine max plant intracellular Ras-group-related LRR protein 6-like (LOC100781571), transcript variant X1, mRNA	plant intracellular Ras-group-related LRR protein 6-like(LOC100781571)	coding protein	psRNATarget