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BaseInfo

ncRNA ID	novel_gma_miR3821
Species	Glycine max
Class	miRNA
Genome position	Chr19:33556332-33556395 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451676
Length	20
Mature sequence(if miRNA)	45 - UAGGGUUUAGGGUUUAAGGU - 64
Stem-loop(if miRNA)	--    G    G G          AG    UAG   UAGG UUUA G UUUAAGGUUU  GAUU   U   |||| |||| | ||||||||||  ||||   AUUU GGAU U GGAUUCCGAA  CUGG   G AU    G    - G          -A    UAU
Stem-loop sequence	UAGGGUUUAGGGUUUAAGGUUUAGGAUUUAGUGUAUGGUCAAAGCCUUAGGGUUAGGGUUUAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003543160.3	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   =|||||||||||||||||*| targets:27   GCCUUAAACCCUAAACCCAA   46 Target Full Sequence	1.5	PREDICTED: Glycine max cytochrome c oxidase assembly factor 5 (LOC100500616), mRNA	cytochrome c oxidase assembly factor 5(LOC100500616)	coding protein	psRNATarget
XM_006602058.2	ncRNA:20   UGGA-AUUUGGGAUUUGGGAU   1   *|||-|||||||||||||||| targets:15   CCCUGUAAACCCUAAACCCUA   35 Target Full Sequence	2.0	PREDICTED: Glycine max probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase (LOC100807160), mRNA	probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase(LOC100807160)	coding protein	psRNATarget
XM_006605735.2	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   |*|*|||||||||||||||| targets:99   AGCAUAAACCCUAAACCCUA   118 Target Full Sequence	2.0	PREDICTED: Glycine max rhodanese-like domain-containing protein 6 (LOC100786152), mRNA	rhodanese-like domain-containing protein 6(LOC100786152)	coding protein	psRNATarget
XM_006589047.2	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   **|*|||||||||||||||| targets:141   UGCAUAAACCCUAAACCCUA   160 Target Full Sequence	2.0	PREDICTED: Glycine max rhodanese-like domain-containing protein 6 (LOC100799148), mRNA	rhodanese-like domain-containing protein 6(LOC100799148)	coding protein	psRNATarget
XM_006577175.2	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   *||*|||||||||||||||* targets:305   UCCCUAAACCCUAAACCCUC   324 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC102669955 (LOC102669955), mRNA	uncharacterized LOC102669955(LOC102669955)	coding protein	psRNATarget
XM_003553675.3	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   *||*|||||||||||||||* targets:392   UCCCUAAACCCUAAACCCUC   411 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100807006 (LOC100807006), mRNA	uncharacterized LOC100807006(LOC100807006)	coding protein	psRNATarget
XM_003519432.3	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   ||||*|||*||||||||||| targets:184   ACCUCAAAACCUAAACCCUA   203 Target Full Sequence	2.5	PREDICTED: Glycine max geranylgeranyl diphosphate reductase, chloroplastic-like (LOC100787525), mRNA	geranylgeranyl diphosphate reductase, chloroplastic-like(LOC100787525)	coding protein	psRNATarget
XM_003551684.3	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   *|||*||||*|||||||||| targets:138   CCCUAAAACACUAAACCCUA   157 Target Full Sequence	2.5	PREDICTED: Glycine max cell division protein FtsZ homolog 1, chloroplastic-like (LOC100786112), mRNA	cell division protein FtsZ homolog 1, chloroplastic-like(LOC100786112)	coding protein	psRNATarget
XM_003553180.3	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   =|||*|||||||||||||*| targets:21   GCCUAAAACCCUAAACCCCA   40 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 22-like (LOC100789323), mRNA	DEAD-box ATP-dependent RNA helicase 22-like(LOC100789323)	coding protein	psRNATarget
XM_003530613.3	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   =|||*|||||||||||||*| targets:42   GCCUAAAACCCUAAACCCCA   61 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 22-like (LOC100780518), transcript variant X4, mRNA	DEAD-box ATP-dependent RNA helicase 22-like(LOC100780518)	coding protein	psRNATarget
XM_006585914.2	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   =|||*|||||||||||||*| targets:49   GCCUAAAACCCUAAACCCCA   68 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 22-like (LOC100780518), transcript variant X3, mRNA	DEAD-box ATP-dependent RNA helicase 22-like(LOC100780518)	coding protein	psRNATarget
XM_014779329.1	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   =|||*|||||||||||||*| targets:49   GCCUAAAACCCUAAACCCCA   68 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 22-like (LOC100780518), transcript variant X1, mRNA	DEAD-box ATP-dependent RNA helicase 22-like(LOC100780518)	coding protein	psRNATarget
XM_014779330.1	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   =|||*|||||||||||||*| targets:49   GCCUAAAACCCUAAACCCCA   68 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 22-like (LOC100780518), transcript variant X2, mRNA	DEAD-box ATP-dependent RNA helicase 22-like(LOC100780518)	coding protein	psRNATarget
XM_006586044.2	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   *|||*|||||||||||||*| targets:119   CCCUAAAACCCUAAACCCCA   138 Target Full Sequence	2.5	PREDICTED: Glycine max cell division protein FtsZ homolog 1, chloroplastic-like (LOC100809043), mRNA	cell division protein FtsZ homolog 1, chloroplastic-like(LOC100809043)	coding protein	psRNATarget
XM_006577704.2	ncRNA:20   UGGAAUUUGGGAUUUGGGAU   1   *=|||*|||||||||||||* targets:33   CUCUUCAACCCUAAACCCUC   52 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100306274 (LOC100306274), transcript variant X1, mRNA	uncharacterized LOC100306274(LOC100306274)	coding protein	psRNATarget