ncRNA ID | novel_gma_miR3816 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:54397816-54397859 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 21 |
Mature sequence(if miRNA) | 24 - UUGAGUUUUUGUUCUUCAGGG - 44 |
Stem-loop(if miRNA) |
--AA    U  U      -   A     GAGG AC AAAAAC CAA U     |||| || |||||| |||     CUUC UG UUUUUG GUU U GGGA    U  -      A   U |
Stem-loop sequence | AAGAGGUACUAAAAACCAAAUUUUUGAGUUUUUGUUCUUCAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006604278.2 |
|
2.5 | PREDICTED: Glycine max disease resistance protein RGA2-like (LOC100781317), mRNA | disease resistance protein RGA2-like(LOC100781317) | coding protein | psRNATarget | |||||||||
XM_003531795.3 |
|
3.0 | PREDICTED: Glycine max membrane-anchored ubiquitin-fold protein 2-like (LOC100812438), mRNA | membrane-anchored ubiquitin-fold protein 2-like(LOC100812438) | coding protein | psRNATarget |