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BaseInfo

ncRNA ID novel_gma_miR3816
Species Glycine max
Class miRNA
Genome position Chr18:54397816-54397859 [+]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 24 - UUGAGUUUUUGUUCUUCAGGG - 44
Stem-loop(if miRNA) --AA    U  U      -   A
    GAGG AC AAAAAC CAA U
    |||| || |||||| |||
    CUUC UG UUUUUG GUU U
GGGA    U  -      A   U
Stem-loop sequence AAGAGGUACUAAAAACCAAAUUUUUGAGUUUUUGUUCUUCAGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604278.2
ncRNA:21   GGGACUUCUUGUUUUUGAGUU   1
  ||*||||||||||||*|||||
targets:2333   CCAUGAAGAACAAAACCUCAA   2353

2.5 PREDICTED: Glycine max disease resistance protein RGA2-like (LOC100781317), mRNA disease resistance protein RGA2-like(LOC100781317) coding protein psRNATarget
XM_003531795.3
ncRNA:21   GGGACUUCUUGUUUUUGAGUU   1
  |||**|||||||||||||||=
targets:175   CCCACAAGAACAAAAACUCAG   195

3.0 PREDICTED: Glycine max membrane-anchored ubiquitin-fold protein 2-like (LOC100812438), mRNA membrane-anchored ubiquitin-fold protein 2-like(LOC100812438) coding protein psRNATarget