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BaseInfo

ncRNA ID novel_gma_miR3812
Species Glycine max
Class miRNA
Genome position Chr18:3898905-3898956 [-]
Reference genome Glycine_max_v2.0
Source SRR1451676
Length 21
Mature sequence(if miRNA) 32 - GUUUUGUUGGGACUUUUGCAG - 52
Stem-loop(if miRNA) --     --        UUUU     UUC
  GUUUU  GUUGGGAC    GCAGG   A
  |||||  ||||||||    |||||
  CAAGG  UAGCUCUG    UGUUC   G
GA     GG        ----     UAU
Stem-loop sequence GUUUUGUUGGGACUUUUGCAGGUUCAGUAUCUUGUGUCUCGAUGGGGAACAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098615.1
ncRNA:21   GACGUUUUCAGGGUUGUUUUG   1
  =||||||||||||||*||||*
targets:59   UUGCAAAAGUCCCAAAAAAAG   79

2.5 Soybean clone JCVI-FLGm-12B8 unknown mRNA NA coding protein psRNATarget
XM_003552369.2
ncRNA:21   GACGUUUUCAGGGUUGUUUUG   1
  |**||=||||||||||||||*
targets:1345   CGUCAGAAGUCCCAACAAAAA   1365

3.0 PREDICTED: Glycine max C-terminal binding protein AN-like (LOC100819434), mRNA C-terminal binding protein AN-like(LOC100819434) coding protein psRNATarget