ncRNA ID | novel_gma_miR3809 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:8409244-8409285 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GUUAUUGUUGUAUUUUGAUC - 20 |
Stem-loop(if miRNA) |
---UUU    G     -   UU       AAUG GAUAA AAU  U       |||| ||||| |||       UUAU UUGUU UUG  G CUAGUU    G     A   UU |
Stem-loop sequence | UUUAAUGGGAUAAAAUUUUGUUGUUAUUGUUGUAUUUUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520081.3 |
|
2.5 | PREDICTED: Glycine max protein BIG GRAIN 1-like E (LOC100775233), mRNA | protein BIG GRAIN 1-like E(LOC100775233) | coding protein | psRNATarget | |||||||||
XM_003543350.3 |
|
3.0 | PREDICTED: Glycine max fasciclin-like arabinogalactan protein 15 (LOC100815434), transcript variant X1, mRNA | fasciclin-like arabinogalactan protein 15(LOC100815434) | coding protein | psRNATarget |