ncRNA ID | novel_gma_miR3801 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:46812552-46812662 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451676 |
Length | 20 |
Mature sequence(if miRNA) | 92 - AGCAAGUUGGUGUCCACAGG - 111 |
Stem-loop(if miRNA) |
A    -       -    -  G     -----    -    --A      ----UU   G    GCAA GUUGGUG UCCA CA GAGCA     AGUG UUGA   CCAUCC      GGU GAU  |||| ||||||| |||| || |||||     |||| ||||   ||||||      ||| ||U  UGUU UAACCAU AGGU GU UUUGU     UCAC AACU   GGUAGG      UCA UUC -    G       G    C  A     GAAAG    C    CAA      UGUUAU   G   |
Stem-loop sequence | AGCAAGUUGGUGUCCACAGGAGCAAGUGUUGAACCAUCCUUGGUGGAUUCUUGACUUAUUGUGGAUGGAACUCAACCACUGAAAGUGUUUAUGCUGGAGUACCAAUGUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT099198.1 |
|
1.5 | Soybean clone JCVI-FLGm-26J8 unknown mRNA | NA | coding protein | psRNATarget |